Gene : Bradi1g22840 B. distachyon v3.1
Defline:  (1 of 9) PF07899 - Frigida-like protein (Frigida) Genomic Order:  2858
Name:  ? Bradi1g22840 Secondary Identifier:  ? PAC:32798750
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi1g22840 0.5kb upstream 0.5kb upstream 4119 true Bd1: 18355518-18359636 Brachypodium distachyon
Bradi1g22840 0.5kb upstream 0.5kb upstream 500 false Bd1: 18355518-18356017 Brachypodium distachyon
Bradi1g22840 0.5kb downstream 0.5kb downstream 4119 true Bd1: 18356018-18360136 Brachypodium distachyon
Bradi1g22840 0.5kb downstream 0.5kb downstream 500 false Bd1: 18359637-18360136 Brachypodium distachyon
Bradi1g22840 1.0kb upstream 1.0kb upstream 4619 true Bd1: 18355018-18359636 Brachypodium distachyon
Bradi1g22840 1.0kb upstream 1.0kb upstream 1000 false Bd1: 18355018-18356017 Brachypodium distachyon
Bradi1g22840 1.0kb downstream 1.0kb downstream 4619 true Bd1: 18356018-18360636 Brachypodium distachyon
Bradi1g22840 1.0kb downstream 1.0kb downstream 1000 false Bd1: 18359637-18360636 Brachypodium distachyon
Bradi1g22840 2.0kb upstream 2.0kb upstream 5619 true Bd1: 18354018-18359636 Brachypodium distachyon
Bradi1g22840 2.0kb upstream 2.0kb upstream 2000 false Bd1: 18354018-18356017 Brachypodium distachyon
Bradi1g22840 2.0kb downstream 2.0kb downstream 5619 true Bd1: 18356018-18361636 Brachypodium distachyon
Bradi1g22840 2.0kb downstream 2.0kb downstream 2000 false Bd1: 18359637-18361636 Brachypodium distachyon
Bradi1g22840 5.0kb upstream 5.0kb upstream 8619 true Bd1: 18351018-18359636 Brachypodium distachyon
Bradi1g22840 5.0kb upstream 5.0kb upstream 5000 false Bd1: 18351018-18356017 Brachypodium distachyon
Bradi1g22840 5.0kb downstream 5.0kb downstream 8619 true Bd1: 18356018-18364636 Brachypodium distachyon
Bradi1g22840 5.0kb downstream 5.0kb downstream 5000 false Bd1: 18359637-18364636 Brachypodium distachyon
Bradi1g22840 10.0kb upstream 10.0kb upstream 13619 true Bd1: 18346018-18359636 Brachypodium distachyon
Bradi1g22840 10.0kb upstream 10.0kb upstream 10000 false Bd1: 18346018-18356017 Brachypodium distachyon
Bradi1g22840 10.0kb downstream 10.0kb downstream 13619 true Bd1: 18356018-18369636 Brachypodium distachyon
Bradi1g22840 10.0kb downstream 10.0kb downstream 10000 false Bd1: 18359637-18369636 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124579706 5269 Grass View MSA
122049415 5273 Angiosperm View MSA
121351127 5274 Embryophyte View MSA
123382017 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 9.931     High  
cufflinks 10.754     High  
cufflinks 10.676     High  
cufflinks 7.493        
cufflinks 4.385       Low
cufflinks 9.738     High  
cufflinks 10.718     High  
cufflinks 8.359        
cufflinks 8.983        
cufflinks 5.425        
cufflinks 9.039     High  
cufflinks 9.017        
cufflinks 7.073        
cufflinks 6.953        
cufflinks 6.589        
cufflinks 11.456     High  
cufflinks 5.5        
cufflinks 12.946     High High
cufflinks 7.529        
cufflinks 1.901       Low
cufflinks 7.013        
cufflinks 9.143        
cufflinks 7.791        
cufflinks 7.457        
cufflinks 7.097        
cufflinks 7.927        
cufflinks 9.954     High  
cufflinks 8.589        
cufflinks 7.968        
cufflinks 10.314        

0 Strain