Gene : Bradi1g23490 B. distachyon v3.1
Defline:  (1 of 1) K11338 - RuvB-like protein 2 [EC:3.6.4.12] (RUVBL2, RVB2, INO80J) Genomic Order:  2942
Name:  ? Bradi1g23490 Secondary Identifier:  ? PAC:32796079
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi1g23490 0.5kb upstream 0.5kb upstream 5777 true Bd1: 18898414-18904190 Brachypodium distachyon
Bradi1g23490 0.5kb upstream 0.5kb upstream 500 false Bd1: 18903691-18904190 Brachypodium distachyon
Bradi1g23490 0.5kb downstream 0.5kb downstream 5777 true Bd1: 18897914-18903690 Brachypodium distachyon
Bradi1g23490 0.5kb downstream 0.5kb downstream 500 false Bd1: 18897914-18898413 Brachypodium distachyon
Bradi1g23490 1.0kb upstream 1.0kb upstream 6277 true Bd1: 18898414-18904690 Brachypodium distachyon
Bradi1g23490 1.0kb upstream 1.0kb upstream 1000 false Bd1: 18903691-18904690 Brachypodium distachyon
Bradi1g23490 1.0kb downstream 1.0kb downstream 6277 true Bd1: 18897414-18903690 Brachypodium distachyon
Bradi1g23490 1.0kb downstream 1.0kb downstream 1000 false Bd1: 18897414-18898413 Brachypodium distachyon
Bradi1g23490 2.0kb upstream 2.0kb upstream 7277 true Bd1: 18898414-18905690 Brachypodium distachyon
Bradi1g23490 2.0kb upstream 2.0kb upstream 2000 false Bd1: 18903691-18905690 Brachypodium distachyon
Bradi1g23490 2.0kb downstream 2.0kb downstream 7277 true Bd1: 18896414-18903690 Brachypodium distachyon
Bradi1g23490 2.0kb downstream 2.0kb downstream 2000 false Bd1: 18896414-18898413 Brachypodium distachyon
Bradi1g23490 5.0kb upstream 5.0kb upstream 10277 true Bd1: 18898414-18908690 Brachypodium distachyon
Bradi1g23490 5.0kb upstream 5.0kb upstream 5000 false Bd1: 18903691-18908690 Brachypodium distachyon
Bradi1g23490 5.0kb downstream 5.0kb downstream 10277 true Bd1: 18893414-18903690 Brachypodium distachyon
Bradi1g23490 5.0kb downstream 5.0kb downstream 5000 false Bd1: 18893414-18898413 Brachypodium distachyon
Bradi1g23490 10.0kb upstream 10.0kb upstream 15277 true Bd1: 18898414-18913690 Brachypodium distachyon
Bradi1g23490 10.0kb upstream 10.0kb upstream 10000 false Bd1: 18903691-18913690 Brachypodium distachyon
Bradi1g23490 10.0kb downstream 10.0kb downstream 15277 true Bd1: 18888414-18903690 Brachypodium distachyon
Bradi1g23490 10.0kb downstream 10.0kb downstream 10000 false Bd1: 18888414-18898413 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124584257 5269 Grass View MSA
122045825 5273 Angiosperm View MSA
121346627 5274 Embryophyte View MSA
123423891 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.075        
cufflinks 6.002        
cufflinks 4.84        
cufflinks 5.747        
cufflinks 2.376       Low
cufflinks 5.548        
cufflinks 5.685        
cufflinks 5.073        
cufflinks 5.008        
cufflinks 3.411        
cufflinks 2.65        
cufflinks 3.988        
cufflinks 1.811       Low
cufflinks 2.19       Low
cufflinks 1.787       Low
cufflinks 5.441        
cufflinks 4.292        
cufflinks 11.647     High High
cufflinks 5.376        
cufflinks 2.693        
cufflinks 6.311        
cufflinks 3.397        
cufflinks 3.82        
cufflinks 4.146        
cufflinks 5.497        
cufflinks 3.928        
cufflinks 2.791        
cufflinks 3.67        
cufflinks 3.402        
cufflinks 7.357       High

0 Strain