Gene : Bradi1g23400 B. distachyon v3.1
Defline:  (1 of 1) PTHR13068:SF13 - MITOCHONDRIAL TRANSCRIPTION TERMINATION FACTOR FAMILY PROTEIN Genomic Order:  2931
Name:  ? Bradi1g23400 Secondary Identifier:  ? PAC:32806499
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi1g23400 0.5kb upstream 0.5kb upstream 4899 true Bd1: 18784874-18789772 Brachypodium distachyon
Bradi1g23400 0.5kb upstream 0.5kb upstream 500 false Bd1: 18789273-18789772 Brachypodium distachyon
Bradi1g23400 0.5kb downstream 0.5kb downstream 4899 true Bd1: 18784374-18789272 Brachypodium distachyon
Bradi1g23400 0.5kb downstream 0.5kb downstream 500 false Bd1: 18784374-18784873 Brachypodium distachyon
Bradi1g23400 1.0kb upstream 1.0kb upstream 5399 true Bd1: 18784874-18790272 Brachypodium distachyon
Bradi1g23400 1.0kb upstream 1.0kb upstream 1000 false Bd1: 18789273-18790272 Brachypodium distachyon
Bradi1g23400 1.0kb downstream 1.0kb downstream 5399 true Bd1: 18783874-18789272 Brachypodium distachyon
Bradi1g23400 1.0kb downstream 1.0kb downstream 1000 false Bd1: 18783874-18784873 Brachypodium distachyon
Bradi1g23400 2.0kb upstream 2.0kb upstream 6399 true Bd1: 18784874-18791272 Brachypodium distachyon
Bradi1g23400 2.0kb upstream 2.0kb upstream 2000 false Bd1: 18789273-18791272 Brachypodium distachyon
Bradi1g23400 2.0kb downstream 2.0kb downstream 6399 true Bd1: 18782874-18789272 Brachypodium distachyon
Bradi1g23400 2.0kb downstream 2.0kb downstream 2000 false Bd1: 18782874-18784873 Brachypodium distachyon
Bradi1g23400 5.0kb upstream 5.0kb upstream 9399 true Bd1: 18784874-18794272 Brachypodium distachyon
Bradi1g23400 5.0kb upstream 5.0kb upstream 5000 false Bd1: 18789273-18794272 Brachypodium distachyon
Bradi1g23400 5.0kb downstream 5.0kb downstream 9399 true Bd1: 18779874-18789272 Brachypodium distachyon
Bradi1g23400 5.0kb downstream 5.0kb downstream 5000 false Bd1: 18779874-18784873 Brachypodium distachyon
Bradi1g23400 10.0kb upstream 10.0kb upstream 14399 true Bd1: 18784874-18799272 Brachypodium distachyon
Bradi1g23400 10.0kb upstream 10.0kb upstream 10000 false Bd1: 18789273-18799272 Brachypodium distachyon
Bradi1g23400 10.0kb downstream 10.0kb downstream 14399 true Bd1: 18774874-18789272 Brachypodium distachyon
Bradi1g23400 10.0kb downstream 10.0kb downstream 10000 false Bd1: 18774874-18784873 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124579114 5269 Grass View MSA
122044660 5273 Angiosperm View MSA
121345820 5274 Embryophyte View MSA
123427998 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 6.44        
cufflinks 9.604        
cufflinks 8.915        
cufflinks 6.763        
cufflinks 2.044       Low
cufflinks 11.299     High  
cufflinks 11.897     High High
cufflinks 3.54        
cufflinks 5.381        
cufflinks 5.401        
cufflinks 10.863     High  
cufflinks 6.431        
cufflinks 9.582     High  
cufflinks 9.483     High  
cufflinks 3.049        
cufflinks 15.434     High High
cufflinks 3.633        
cufflinks 3.675        
cufflinks 2.409       Low
cufflinks 1.869       Low
cufflinks 4.142        
cufflinks 5.6        
cufflinks 3.279        
cufflinks 6.053        
cufflinks 9.398        
cufflinks 8.543        
cufflinks 14.175     High High
cufflinks 7.99        
cufflinks 6.56        
cufflinks 6.665        

0 Strain