Gene : Bradi1g29220 B. distachyon v3.1
Genomic Order:  3692 Name:  ? Bradi1g29220
Secondary Identifier:  ? PAC:32806002
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi1g29220 0.5kb upstream 0.5kb upstream 3500 true Bd1: 24789456-24792955 Brachypodium distachyon
Bradi1g29220 0.5kb upstream 0.5kb upstream 500 false Bd1: 24789456-24789955 Brachypodium distachyon
Bradi1g29220 0.5kb downstream 0.5kb downstream 3500 true Bd1: 24789956-24793455 Brachypodium distachyon
Bradi1g29220 0.5kb downstream 0.5kb downstream 500 false Bd1: 24792956-24793455 Brachypodium distachyon
Bradi1g29220 1.0kb upstream 1.0kb upstream 4000 true Bd1: 24788956-24792955 Brachypodium distachyon
Bradi1g29220 1.0kb upstream 1.0kb upstream 1000 false Bd1: 24788956-24789955 Brachypodium distachyon
Bradi1g29220 1.0kb downstream 1.0kb downstream 4000 true Bd1: 24789956-24793955 Brachypodium distachyon
Bradi1g29220 1.0kb downstream 1.0kb downstream 1000 false Bd1: 24792956-24793955 Brachypodium distachyon
Bradi1g29220 2.0kb upstream 2.0kb upstream 5000 true Bd1: 24787956-24792955 Brachypodium distachyon
Bradi1g29220 2.0kb upstream 2.0kb upstream 2000 false Bd1: 24787956-24789955 Brachypodium distachyon
Bradi1g29220 2.0kb downstream 2.0kb downstream 5000 true Bd1: 24789956-24794955 Brachypodium distachyon
Bradi1g29220 2.0kb downstream 2.0kb downstream 2000 false Bd1: 24792956-24794955 Brachypodium distachyon
Bradi1g29220 5.0kb upstream 5.0kb upstream 8000 true Bd1: 24784956-24792955 Brachypodium distachyon
Bradi1g29220 5.0kb upstream 5.0kb upstream 5000 false Bd1: 24784956-24789955 Brachypodium distachyon
Bradi1g29220 5.0kb downstream 5.0kb downstream 8000 true Bd1: 24789956-24797955 Brachypodium distachyon
Bradi1g29220 5.0kb downstream 5.0kb downstream 5000 false Bd1: 24792956-24797955 Brachypodium distachyon
Bradi1g29220 10.0kb upstream 10.0kb upstream 13000 true Bd1: 24779956-24792955 Brachypodium distachyon
Bradi1g29220 10.0kb upstream 10.0kb upstream 10000 false Bd1: 24779956-24789955 Brachypodium distachyon
Bradi1g29220 10.0kb downstream 10.0kb downstream 13000 true Bd1: 24789956-24802955 Brachypodium distachyon
Bradi1g29220 10.0kb downstream 10.0kb downstream 10000 false Bd1: 24792956-24802955 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122027742 5273 Angiosperm View MSA
124576845 5269 Grass View MSA
121347377 5274 Embryophyte View MSA
123425505 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 9.795     High  
cufflinks 15.634     High  
cufflinks 13.16     High  
cufflinks 18.135     High High
cufflinks 5.41        
cufflinks 10.775     High  
cufflinks 12.787     High  
cufflinks 9.046        
cufflinks 8.783        
cufflinks 11.073     High  
cufflinks 10.21     High  
cufflinks 9.866     High  
cufflinks 8.459     High  
cufflinks 11.046     High  
cufflinks 10.819     High  
cufflinks 11.104     High  
cufflinks 13.013     High  
cufflinks 1.479       Low
cufflinks 6.322        
cufflinks 1.497       Low
cufflinks 9.433        
cufflinks 8.306        
cufflinks 8.833        
cufflinks 10.214     High  
cufflinks 13.305     High  
cufflinks 14.935     High  
cufflinks 9.647     High  
cufflinks 13.811     High  
cufflinks 10.419        
cufflinks 11.243        

0 Strain