Gene : Bradi1g26940 B. distachyon v3.1
Defline:  (1 of 1) PTHR10799//PTHR10799:SF625 - SWI/SNF-RELATED MATRIX-ASSOCIATED ACTIN-DEPENDENT REGULATOR OF CHROMATIN SUBFAMILY-RELATED // SUBFAMILY NOT NAMED Genomic Order:  3391
Name:  ? Bradi1g26940 Secondary Identifier:  ? PAC:32806446
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi1g26940 0.5kb upstream 0.5kb upstream 14741 true Bd1: 22054224-22068964 Brachypodium distachyon
Bradi1g26940 0.5kb upstream 0.5kb upstream 500 false Bd1: 22054224-22054723 Brachypodium distachyon
Bradi1g26940 0.5kb downstream 0.5kb downstream 14741 true Bd1: 22054724-22069464 Brachypodium distachyon
Bradi1g26940 0.5kb downstream 0.5kb downstream 500 false Bd1: 22068965-22069464 Brachypodium distachyon
Bradi1g26940 1.0kb upstream 1.0kb upstream 15241 true Bd1: 22053724-22068964 Brachypodium distachyon
Bradi1g26940 1.0kb upstream 1.0kb upstream 1000 false Bd1: 22053724-22054723 Brachypodium distachyon
Bradi1g26940 1.0kb downstream 1.0kb downstream 15241 true Bd1: 22054724-22069964 Brachypodium distachyon
Bradi1g26940 1.0kb downstream 1.0kb downstream 1000 false Bd1: 22068965-22069964 Brachypodium distachyon
Bradi1g26940 2.0kb upstream 2.0kb upstream 16241 true Bd1: 22052724-22068964 Brachypodium distachyon
Bradi1g26940 2.0kb upstream 2.0kb upstream 2000 false Bd1: 22052724-22054723 Brachypodium distachyon
Bradi1g26940 2.0kb downstream 2.0kb downstream 16241 true Bd1: 22054724-22070964 Brachypodium distachyon
Bradi1g26940 2.0kb downstream 2.0kb downstream 2000 false Bd1: 22068965-22070964 Brachypodium distachyon
Bradi1g26940 5.0kb upstream 5.0kb upstream 19241 true Bd1: 22049724-22068964 Brachypodium distachyon
Bradi1g26940 5.0kb upstream 5.0kb upstream 5000 false Bd1: 22049724-22054723 Brachypodium distachyon
Bradi1g26940 5.0kb downstream 5.0kb downstream 19241 true Bd1: 22054724-22073964 Brachypodium distachyon
Bradi1g26940 5.0kb downstream 5.0kb downstream 5000 false Bd1: 22068965-22073964 Brachypodium distachyon
Bradi1g26940 10.0kb upstream 10.0kb upstream 24241 true Bd1: 22044724-22068964 Brachypodium distachyon
Bradi1g26940 10.0kb upstream 10.0kb upstream 10000 false Bd1: 22044724-22054723 Brachypodium distachyon
Bradi1g26940 10.0kb downstream 10.0kb downstream 24241 true Bd1: 22054724-22078964 Brachypodium distachyon
Bradi1g26940 10.0kb downstream 10.0kb downstream 10000 false Bd1: 22068965-22078964 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124582511 5269 Grass View MSA
122042077 5273 Angiosperm View MSA
121346690 5274 Embryophyte View MSA
123428510 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.331        
cufflinks 8.628        
cufflinks 10.064       High
cufflinks 5.698        
cufflinks 1.805       Low
cufflinks 6.438        
cufflinks 6.041        
cufflinks 5.651        
cufflinks 6.317        
cufflinks 3.877        
cufflinks 6.292        
cufflinks 9.021       High
cufflinks 4.259        
cufflinks 3.828        
cufflinks 4.363        
cufflinks 7.005        
cufflinks 2.339       Low
cufflinks 9.839       High
cufflinks 4.356        
cufflinks 1.233       Low
cufflinks 4.088        
cufflinks 10.576     High High
cufflinks 6.287        
cufflinks 4.893        
cufflinks 4.348        
cufflinks 7.847        
cufflinks 4.974        
cufflinks 7.269        
cufflinks 7.64        
cufflinks 9.153       High

0 Strain