Gene : Bradi1g28080 B. distachyon v3.1
Defline:  (1 of 1) PTHR11071//PTHR11071:SF200 - PEPTIDYL-PROLYL CIS-TRANS ISOMERASE // CYCLOPHILIN-LIKE PEPTIDYL-PROLYL CIS-TRANS ISOMERASE FAMILY PROTEIN-RELATED Genomic Order:  3527
Name:  ? Bradi1g28080 Secondary Identifier:  ? PAC:32798368
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi1g28080 0.5kb upstream 0.5kb upstream 7044 true Bd1: 23232331-23239374 Brachypodium distachyon
Bradi1g28080 0.5kb upstream 0.5kb upstream 500 false Bd1: 23238875-23239374 Brachypodium distachyon
Bradi1g28080 0.5kb downstream 0.5kb downstream 7044 true Bd1: 23231831-23238874 Brachypodium distachyon
Bradi1g28080 0.5kb downstream 0.5kb downstream 500 false Bd1: 23231831-23232330 Brachypodium distachyon
Bradi1g28080 1.0kb upstream 1.0kb upstream 7544 true Bd1: 23232331-23239874 Brachypodium distachyon
Bradi1g28080 1.0kb upstream 1.0kb upstream 1000 false Bd1: 23238875-23239874 Brachypodium distachyon
Bradi1g28080 1.0kb downstream 1.0kb downstream 7544 true Bd1: 23231331-23238874 Brachypodium distachyon
Bradi1g28080 1.0kb downstream 1.0kb downstream 1000 false Bd1: 23231331-23232330 Brachypodium distachyon
Bradi1g28080 2.0kb upstream 2.0kb upstream 8544 true Bd1: 23232331-23240874 Brachypodium distachyon
Bradi1g28080 2.0kb upstream 2.0kb upstream 2000 false Bd1: 23238875-23240874 Brachypodium distachyon
Bradi1g28080 2.0kb downstream 2.0kb downstream 8544 true Bd1: 23230331-23238874 Brachypodium distachyon
Bradi1g28080 2.0kb downstream 2.0kb downstream 2000 false Bd1: 23230331-23232330 Brachypodium distachyon
Bradi1g28080 5.0kb upstream 5.0kb upstream 11544 true Bd1: 23232331-23243874 Brachypodium distachyon
Bradi1g28080 5.0kb upstream 5.0kb upstream 5000 false Bd1: 23238875-23243874 Brachypodium distachyon
Bradi1g28080 5.0kb downstream 5.0kb downstream 11544 true Bd1: 23227331-23238874 Brachypodium distachyon
Bradi1g28080 5.0kb downstream 5.0kb downstream 5000 false Bd1: 23227331-23232330 Brachypodium distachyon
Bradi1g28080 10.0kb upstream 10.0kb upstream 16544 true Bd1: 23232331-23248874 Brachypodium distachyon
Bradi1g28080 10.0kb upstream 10.0kb upstream 10000 false Bd1: 23238875-23248874 Brachypodium distachyon
Bradi1g28080 10.0kb downstream 10.0kb downstream 16544 true Bd1: 23222331-23238874 Brachypodium distachyon
Bradi1g28080 10.0kb downstream 10.0kb downstream 10000 false Bd1: 23222331-23232330 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124575925 5269 Grass View MSA
122046189 5273 Angiosperm View MSA
123428973 5275 Viridiplantae View MSA
121350485 5274 Embryophyte View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.451        
cufflinks 3.314        
cufflinks 2.824        
cufflinks 3.003        
cufflinks 1.81       Low
cufflinks 3.181        
cufflinks 3.513        
cufflinks 1.949        
cufflinks 2.519        
cufflinks 2.285        
cufflinks 2.663        
cufflinks 2.73        
cufflinks 2.597        
cufflinks 2.593        
cufflinks 2.012        
cufflinks 3.201        
cufflinks 2.068        
cufflinks 3.163        
cufflinks 2.781        
cufflinks 1.05       Low
cufflinks 3.59        
cufflinks 2.41        
cufflinks 2.055        
cufflinks 2.682        
cufflinks 3.461        
cufflinks 3.088        
cufflinks 3.588        
cufflinks 2.718        
cufflinks 2.748        
cufflinks 3.809       High

0 Strain