Gene : Bradi5g01990 B. distachyon v3.1
Defline:  (1 of 1) KOG1188 - WD40 repeat protein Genomic Order:  207
Name:  ? Bradi5g01990 Secondary Identifier:  ? PAC:32809668
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi5g01990 0.5kb upstream 0.5kb upstream 8815 true Bd5: 2090327-2099141 Brachypodium distachyon
Bradi5g01990 0.5kb upstream 0.5kb upstream 500 false Bd5: 2090327-2090826 Brachypodium distachyon
Bradi5g01990 0.5kb downstream 0.5kb downstream 8815 true Bd5: 2090827-2099641 Brachypodium distachyon
Bradi5g01990 0.5kb downstream 0.5kb downstream 500 false Bd5: 2099142-2099641 Brachypodium distachyon
Bradi5g01990 1.0kb upstream 1.0kb upstream 9315 true Bd5: 2089827-2099141 Brachypodium distachyon
Bradi5g01990 1.0kb upstream 1.0kb upstream 1000 false Bd5: 2089827-2090826 Brachypodium distachyon
Bradi5g01990 1.0kb downstream 1.0kb downstream 9315 true Bd5: 2090827-2100141 Brachypodium distachyon
Bradi5g01990 1.0kb downstream 1.0kb downstream 1000 false Bd5: 2099142-2100141 Brachypodium distachyon
Bradi5g01990 2.0kb upstream 2.0kb upstream 10315 true Bd5: 2088827-2099141 Brachypodium distachyon
Bradi5g01990 2.0kb upstream 2.0kb upstream 2000 false Bd5: 2088827-2090826 Brachypodium distachyon
Bradi5g01990 2.0kb downstream 2.0kb downstream 10315 true Bd5: 2090827-2101141 Brachypodium distachyon
Bradi5g01990 2.0kb downstream 2.0kb downstream 2000 false Bd5: 2099142-2101141 Brachypodium distachyon
Bradi5g01990 5.0kb upstream 5.0kb upstream 13315 true Bd5: 2085827-2099141 Brachypodium distachyon
Bradi5g01990 5.0kb upstream 5.0kb upstream 5000 false Bd5: 2085827-2090826 Brachypodium distachyon
Bradi5g01990 5.0kb downstream 5.0kb downstream 13315 true Bd5: 2090827-2104141 Brachypodium distachyon
Bradi5g01990 5.0kb downstream 5.0kb downstream 5000 false Bd5: 2099142-2104141 Brachypodium distachyon
Bradi5g01990 10.0kb upstream 10.0kb upstream 18315 true Bd5: 2080827-2099141 Brachypodium distachyon
Bradi5g01990 10.0kb upstream 10.0kb upstream 10000 false Bd5: 2080827-2090826 Brachypodium distachyon
Bradi5g01990 10.0kb downstream 10.0kb downstream 18315 true Bd5: 2090827-2109141 Brachypodium distachyon
Bradi5g01990 10.0kb downstream 10.0kb downstream 10000 false Bd5: 2099142-2109141 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124579723 5269 Grass View MSA
122044076 5273 Angiosperm View MSA
121344334 5274 Embryophyte View MSA
123425104 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.942       High
cufflinks 0.712        
cufflinks 0.694        
cufflinks 0.662        
cufflinks 0.522        
cufflinks 0.682        
cufflinks 0.638        
cufflinks 0.611        
cufflinks 0.649        
cufflinks 0.622        
cufflinks 0.462       Low
cufflinks 0.506       Low
cufflinks 0.439       Low
cufflinks 0.432       Low
cufflinks 0.77        
cufflinks 0.715        
cufflinks 0.889        
cufflinks 1.251       High
cufflinks 0.794        
cufflinks 0.691        
cufflinks 0.838        
cufflinks 0.576        
cufflinks 0.594        
cufflinks 0.59        
cufflinks 0.703        
cufflinks 0.653        
cufflinks 0.514       Low
cufflinks 0.713        
cufflinks 0.675        
cufflinks 0.864        

0 Strain