Gene : Bradi5g09190 B. distachyon v3.1
Defline:  (1 of 1) PTHR10625//PTHR10625:SF124 - HISTONE DEACETYLASE // HISTONE DEACETYLASE 9 Genomic Order:  926
Name:  ? Bradi5g09190 Secondary Identifier:  ? PAC:32808329
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi5g09190 0.5kb upstream 0.5kb upstream 6193 true Bd5: 12567864-12574056 Brachypodium distachyon
Bradi5g09190 0.5kb upstream 0.5kb upstream 500 false Bd5: 12567864-12568363 Brachypodium distachyon
Bradi5g09190 0.5kb downstream 0.5kb downstream 6193 true Bd5: 12568364-12574556 Brachypodium distachyon
Bradi5g09190 0.5kb downstream 0.5kb downstream 500 false Bd5: 12574057-12574556 Brachypodium distachyon
Bradi5g09190 1.0kb upstream 1.0kb upstream 6693 true Bd5: 12567364-12574056 Brachypodium distachyon
Bradi5g09190 1.0kb upstream 1.0kb upstream 1000 false Bd5: 12567364-12568363 Brachypodium distachyon
Bradi5g09190 1.0kb downstream 1.0kb downstream 6693 true Bd5: 12568364-12575056 Brachypodium distachyon
Bradi5g09190 1.0kb downstream 1.0kb downstream 1000 false Bd5: 12574057-12575056 Brachypodium distachyon
Bradi5g09190 2.0kb upstream 2.0kb upstream 7693 true Bd5: 12566364-12574056 Brachypodium distachyon
Bradi5g09190 2.0kb upstream 2.0kb upstream 2000 false Bd5: 12566364-12568363 Brachypodium distachyon
Bradi5g09190 2.0kb downstream 2.0kb downstream 7693 true Bd5: 12568364-12576056 Brachypodium distachyon
Bradi5g09190 2.0kb downstream 2.0kb downstream 2000 false Bd5: 12574057-12576056 Brachypodium distachyon
Bradi5g09190 5.0kb upstream 5.0kb upstream 10693 true Bd5: 12563364-12574056 Brachypodium distachyon
Bradi5g09190 5.0kb upstream 5.0kb upstream 5000 false Bd5: 12563364-12568363 Brachypodium distachyon
Bradi5g09190 5.0kb downstream 5.0kb downstream 10693 true Bd5: 12568364-12579056 Brachypodium distachyon
Bradi5g09190 5.0kb downstream 5.0kb downstream 5000 false Bd5: 12574057-12579056 Brachypodium distachyon
Bradi5g09190 10.0kb upstream 10.0kb upstream 15693 true Bd5: 12558364-12574056 Brachypodium distachyon
Bradi5g09190 10.0kb upstream 10.0kb upstream 10000 false Bd5: 12558364-12568363 Brachypodium distachyon
Bradi5g09190 10.0kb downstream 10.0kb downstream 15693 true Bd5: 12568364-12584056 Brachypodium distachyon
Bradi5g09190 10.0kb downstream 10.0kb downstream 10000 false Bd5: 12574057-12584056 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124580331 5269 Grass View MSA
122041992 5273 Angiosperm View MSA
123429001 5275 Viridiplantae View MSA
121347455 5274 Embryophyte View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.811        
cufflinks 1.118        
cufflinks 1.109        
cufflinks 1.042        
cufflinks 0.632       Low
cufflinks 0.968        
cufflinks 0.912        
cufflinks 0.94        
cufflinks 1.099        
cufflinks 1.084        
cufflinks 1.03        
cufflinks 0.943        
cufflinks 0.884        
cufflinks 0.894        
cufflinks 0.759        
cufflinks 1.071        
cufflinks 1.151        
cufflinks 0.906        
cufflinks 1.202        
cufflinks 0.334       Low
cufflinks 0.754        
cufflinks 1.176        
cufflinks 1.02        
cufflinks 0.895        
cufflinks 0.98        
cufflinks 1.253        
cufflinks 0.913        
cufflinks 1.12        
cufflinks 1.107        
cufflinks 0.872        

0 Strain