Gene : Bradi5g10117 B. distachyon v3.1
Defline:  (1 of 3) KOG1870 - Ubiquitin C-terminal hydrolase Genomic Order:  1051
Name:  ? Bradi5g10117 Secondary Identifier:  ? PAC:32810478
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi5g10117 0.5kb upstream 0.5kb upstream 6891 true Bd5: 13510118-13517008 Brachypodium distachyon
Bradi5g10117 0.5kb upstream 0.5kb upstream 500 false Bd5: 13510118-13510617 Brachypodium distachyon
Bradi5g10117 0.5kb downstream 0.5kb downstream 6891 true Bd5: 13510618-13517508 Brachypodium distachyon
Bradi5g10117 0.5kb downstream 0.5kb downstream 500 false Bd5: 13517009-13517508 Brachypodium distachyon
Bradi5g10117 1.0kb upstream 1.0kb upstream 7391 true Bd5: 13509618-13517008 Brachypodium distachyon
Bradi5g10117 1.0kb upstream 1.0kb upstream 1000 false Bd5: 13509618-13510617 Brachypodium distachyon
Bradi5g10117 1.0kb downstream 1.0kb downstream 7391 true Bd5: 13510618-13518008 Brachypodium distachyon
Bradi5g10117 1.0kb downstream 1.0kb downstream 1000 false Bd5: 13517009-13518008 Brachypodium distachyon
Bradi5g10117 2.0kb upstream 2.0kb upstream 8391 true Bd5: 13508618-13517008 Brachypodium distachyon
Bradi5g10117 2.0kb upstream 2.0kb upstream 2000 false Bd5: 13508618-13510617 Brachypodium distachyon
Bradi5g10117 2.0kb downstream 2.0kb downstream 8391 true Bd5: 13510618-13519008 Brachypodium distachyon
Bradi5g10117 2.0kb downstream 2.0kb downstream 2000 false Bd5: 13517009-13519008 Brachypodium distachyon
Bradi5g10117 5.0kb upstream 5.0kb upstream 11391 true Bd5: 13505618-13517008 Brachypodium distachyon
Bradi5g10117 5.0kb upstream 5.0kb upstream 5000 false Bd5: 13505618-13510617 Brachypodium distachyon
Bradi5g10117 5.0kb downstream 5.0kb downstream 11391 true Bd5: 13510618-13522008 Brachypodium distachyon
Bradi5g10117 5.0kb downstream 5.0kb downstream 5000 false Bd5: 13517009-13522008 Brachypodium distachyon
Bradi5g10117 10.0kb upstream 10.0kb upstream 16391 true Bd5: 13500618-13517008 Brachypodium distachyon
Bradi5g10117 10.0kb upstream 10.0kb upstream 10000 false Bd5: 13500618-13510617 Brachypodium distachyon
Bradi5g10117 10.0kb downstream 10.0kb downstream 16391 true Bd5: 13510618-13527008 Brachypodium distachyon
Bradi5g10117 10.0kb downstream 10.0kb downstream 10000 false Bd5: 13517009-13527008 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041324 5273 Angiosperm View MSA
124572735 5269 Grass View MSA
121348941 5274 Embryophyte View MSA
123381089 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.199       Low
cufflinks 0.57        
cufflinks 0.432        
cufflinks 0.45        
cufflinks 0.129       Low
cufflinks 0.529        
cufflinks 0.491        
cufflinks 0.396        
cufflinks 0.49        
cufflinks 0.32        
cufflinks 0.41        
cufflinks 0.439        
cufflinks 0.347        
cufflinks 0.313        
cufflinks 0.212       Low
cufflinks 0.474        
cufflinks 0.319        
cufflinks 0.652       High
cufflinks 0.33        
cufflinks 0.098     Low Low
cufflinks 0.379        
cufflinks 0.411        
cufflinks 0.368        
cufflinks 0.418        
cufflinks 0.45        
cufflinks 0.373        
cufflinks 0.482        
cufflinks 0.368        
cufflinks 0.369        
cufflinks 0.439        

0 Strain