Gene : Bradi5g13737 B. distachyon v3.1
Defline:  (1 of 1) PTHR13164//PTHR13164:SF6 - CALICYLIN BINDING PROTEIN Genomic Order:  1518
Name:  ? Bradi5g13737 Secondary Identifier:  ? PAC:32811585
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi5g13737 0.5kb upstream 0.5kb upstream 7497 true Bd5: 17377704-17385200 Brachypodium distachyon
Bradi5g13737 0.5kb upstream 0.5kb upstream 500 false Bd5: 17384701-17385200 Brachypodium distachyon
Bradi5g13737 0.5kb downstream 0.5kb downstream 7497 true Bd5: 17377204-17384700 Brachypodium distachyon
Bradi5g13737 0.5kb downstream 0.5kb downstream 500 false Bd5: 17377204-17377703 Brachypodium distachyon
Bradi5g13737 1.0kb upstream 1.0kb upstream 7997 true Bd5: 17377704-17385700 Brachypodium distachyon
Bradi5g13737 1.0kb upstream 1.0kb upstream 1000 false Bd5: 17384701-17385700 Brachypodium distachyon
Bradi5g13737 1.0kb downstream 1.0kb downstream 7997 true Bd5: 17376704-17384700 Brachypodium distachyon
Bradi5g13737 1.0kb downstream 1.0kb downstream 1000 false Bd5: 17376704-17377703 Brachypodium distachyon
Bradi5g13737 2.0kb upstream 2.0kb upstream 8997 true Bd5: 17377704-17386700 Brachypodium distachyon
Bradi5g13737 2.0kb upstream 2.0kb upstream 2000 false Bd5: 17384701-17386700 Brachypodium distachyon
Bradi5g13737 2.0kb downstream 2.0kb downstream 8997 true Bd5: 17375704-17384700 Brachypodium distachyon
Bradi5g13737 2.0kb downstream 2.0kb downstream 2000 false Bd5: 17375704-17377703 Brachypodium distachyon
Bradi5g13737 5.0kb upstream 5.0kb upstream 11997 true Bd5: 17377704-17389700 Brachypodium distachyon
Bradi5g13737 5.0kb upstream 5.0kb upstream 5000 false Bd5: 17384701-17389700 Brachypodium distachyon
Bradi5g13737 5.0kb downstream 5.0kb downstream 11997 true Bd5: 17372704-17384700 Brachypodium distachyon
Bradi5g13737 5.0kb downstream 5.0kb downstream 5000 false Bd5: 17372704-17377703 Brachypodium distachyon
Bradi5g13737 10.0kb upstream 10.0kb upstream 16997 true Bd5: 17377704-17394700 Brachypodium distachyon
Bradi5g13737 10.0kb upstream 10.0kb upstream 10000 false Bd5: 17384701-17394700 Brachypodium distachyon
Bradi5g13737 10.0kb downstream 10.0kb downstream 16997 true Bd5: 17367704-17384700 Brachypodium distachyon
Bradi5g13737 10.0kb downstream 10.0kb downstream 10000 false Bd5: 17367704-17377703 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124585663 5269 Grass View MSA
122042859 5273 Angiosperm View MSA
121310036 5274 Embryophyte View MSA
123347639 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.879        
cufflinks 1.355        
cufflinks 1.43        
cufflinks 0.989        
cufflinks 0.444       Low
cufflinks 1.339        
cufflinks 1.13        
cufflinks 1.346        
cufflinks 1.441        
cufflinks 0.943        
cufflinks 1.451        
cufflinks 1.72        
cufflinks 1.424        
cufflinks 1.061        
cufflinks 1.203        
cufflinks 1.313        
cufflinks 0.655        
cufflinks 1.881       High
cufflinks 0.705        
cufflinks 0.297       Low
cufflinks 1.033        
cufflinks 1.789       High
cufflinks 1.422        
cufflinks 1.198        
cufflinks 1.062        
cufflinks 1.138        
cufflinks 1.54        
cufflinks 1.287        
cufflinks 1.282        
cufflinks 1.461        

0 Strain