Gene : Bradi1g33470 B. distachyon v3.1
Defline:  (1 of 11) PF04784//PF14389 - Protein of unknown function, DUF547 (DUF547) // Leucine-zipper of ternary complex factor MIP1 (Lzipper-MIP1) Genomic Order:  4259
Name:  ? Bradi1g33470 Secondary Identifier:  ? PAC:32795282
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi1g33470 0.5kb upstream 0.5kb upstream 6098 true Bd1: 29082915-29089012 Brachypodium distachyon
Bradi1g33470 0.5kb upstream 0.5kb upstream 500 false Bd1: 29082915-29083414 Brachypodium distachyon
Bradi1g33470 0.5kb downstream 0.5kb downstream 6098 true Bd1: 29083415-29089512 Brachypodium distachyon
Bradi1g33470 0.5kb downstream 0.5kb downstream 500 false Bd1: 29089013-29089512 Brachypodium distachyon
Bradi1g33470 1.0kb upstream 1.0kb upstream 6598 true Bd1: 29082415-29089012 Brachypodium distachyon
Bradi1g33470 1.0kb upstream 1.0kb upstream 1000 false Bd1: 29082415-29083414 Brachypodium distachyon
Bradi1g33470 1.0kb downstream 1.0kb downstream 6598 true Bd1: 29083415-29090012 Brachypodium distachyon
Bradi1g33470 1.0kb downstream 1.0kb downstream 1000 false Bd1: 29089013-29090012 Brachypodium distachyon
Bradi1g33470 2.0kb upstream 2.0kb upstream 7598 true Bd1: 29081415-29089012 Brachypodium distachyon
Bradi1g33470 2.0kb upstream 2.0kb upstream 2000 false Bd1: 29081415-29083414 Brachypodium distachyon
Bradi1g33470 2.0kb downstream 2.0kb downstream 7598 true Bd1: 29083415-29091012 Brachypodium distachyon
Bradi1g33470 2.0kb downstream 2.0kb downstream 2000 false Bd1: 29089013-29091012 Brachypodium distachyon
Bradi1g33470 5.0kb upstream 5.0kb upstream 10598 true Bd1: 29078415-29089012 Brachypodium distachyon
Bradi1g33470 5.0kb upstream 5.0kb upstream 5000 false Bd1: 29078415-29083414 Brachypodium distachyon
Bradi1g33470 5.0kb downstream 5.0kb downstream 10598 true Bd1: 29083415-29094012 Brachypodium distachyon
Bradi1g33470 5.0kb downstream 5.0kb downstream 5000 false Bd1: 29089013-29094012 Brachypodium distachyon
Bradi1g33470 10.0kb upstream 10.0kb upstream 15598 true Bd1: 29073415-29089012 Brachypodium distachyon
Bradi1g33470 10.0kb upstream 10.0kb upstream 10000 false Bd1: 29073415-29083414 Brachypodium distachyon
Bradi1g33470 10.0kb downstream 10.0kb downstream 15598 true Bd1: 29083415-29099012 Brachypodium distachyon
Bradi1g33470 10.0kb downstream 10.0kb downstream 10000 false Bd1: 29089013-29099012 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124589939 5269 Grass View MSA
122050370 5273 Angiosperm View MSA
121350596 5274 Embryophyte View MSA
123381815 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.594        
cufflinks 1.124        
cufflinks 1.384       High
cufflinks 1.045        
cufflinks 0.236       Low
cufflinks 0.877        
cufflinks 0.818        
cufflinks 0.611        
cufflinks 0.776        
cufflinks 0.716        
cufflinks 0.282       Low
cufflinks 0.709        
cufflinks 0.252       Low
cufflinks 0.249       Low
cufflinks 0.24       Low
cufflinks 0.912        
cufflinks 0.7        
cufflinks 1.782       High
cufflinks 0.786        
cufflinks 0.182       Low
cufflinks 1.085        
cufflinks 1.153        
cufflinks 0.611        
cufflinks 0.676        
cufflinks 0.873        
cufflinks 1.085        
cufflinks 0.357        
cufflinks 1.049        
cufflinks 1.003        
cufflinks 0.843        

0 Strain