Gene : Bradi5g18407 B. distachyon v3.1
Defline:  (1 of 1) PTHR10796 - PATCHED-RELATED Genomic Order:  2128
Name:  ? Bradi5g18407 Secondary Identifier:  ? PAC:32810408
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi5g18407 0.5kb upstream 0.5kb upstream 19953 true Bd5: 21568783-21588735 Brachypodium distachyon
Bradi5g18407 0.5kb upstream 0.5kb upstream 500 false Bd5: 21588236-21588735 Brachypodium distachyon
Bradi5g18407 0.5kb downstream 0.5kb downstream 19953 true Bd5: 21568283-21588235 Brachypodium distachyon
Bradi5g18407 0.5kb downstream 0.5kb downstream 500 false Bd5: 21568283-21568782 Brachypodium distachyon
Bradi5g18407 1.0kb upstream 1.0kb upstream 20453 true Bd5: 21568783-21589235 Brachypodium distachyon
Bradi5g18407 1.0kb upstream 1.0kb upstream 1000 false Bd5: 21588236-21589235 Brachypodium distachyon
Bradi5g18407 1.0kb downstream 1.0kb downstream 20453 true Bd5: 21567783-21588235 Brachypodium distachyon
Bradi5g18407 1.0kb downstream 1.0kb downstream 1000 false Bd5: 21567783-21568782 Brachypodium distachyon
Bradi5g18407 2.0kb upstream 2.0kb upstream 21453 true Bd5: 21568783-21590235 Brachypodium distachyon
Bradi5g18407 2.0kb upstream 2.0kb upstream 2000 false Bd5: 21588236-21590235 Brachypodium distachyon
Bradi5g18407 2.0kb downstream 2.0kb downstream 21453 true Bd5: 21566783-21588235 Brachypodium distachyon
Bradi5g18407 2.0kb downstream 2.0kb downstream 2000 false Bd5: 21566783-21568782 Brachypodium distachyon
Bradi5g18407 5.0kb upstream 5.0kb upstream 24453 true Bd5: 21568783-21593235 Brachypodium distachyon
Bradi5g18407 5.0kb upstream 5.0kb upstream 5000 false Bd5: 21588236-21593235 Brachypodium distachyon
Bradi5g18407 5.0kb downstream 5.0kb downstream 24453 true Bd5: 21563783-21588235 Brachypodium distachyon
Bradi5g18407 5.0kb downstream 5.0kb downstream 5000 false Bd5: 21563783-21568782 Brachypodium distachyon
Bradi5g18407 10.0kb upstream 10.0kb upstream 29453 true Bd5: 21568783-21598235 Brachypodium distachyon
Bradi5g18407 10.0kb upstream 10.0kb upstream 10000 false Bd5: 21588236-21598235 Brachypodium distachyon
Bradi5g18407 10.0kb downstream 10.0kb downstream 29453 true Bd5: 21558783-21588235 Brachypodium distachyon
Bradi5g18407 10.0kb downstream 10.0kb downstream 10000 false Bd5: 21558783-21568782 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124577659 5269 Grass View MSA
122045765 5273 Angiosperm View MSA
123429105 5275 Viridiplantae View MSA
121349896 5274 Embryophyte View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.341        
cufflinks 0.507        
cufflinks 0.512        
cufflinks 0.422        
cufflinks 0.095       Low
cufflinks 0.43        
cufflinks 0.392        
cufflinks 0.449        
cufflinks 0.448        
cufflinks 0.407        
cufflinks 0.385        
cufflinks 0.468        
cufflinks 0.364        
cufflinks 0.277        
cufflinks 0.321        
cufflinks 0.43        
cufflinks 0.204       Low
cufflinks 0.737       High
cufflinks 0.536        
cufflinks 0.086     Low Low
cufflinks 0.615        
cufflinks 0.822       High
cufflinks 0.488        
cufflinks 0.413        
cufflinks 0.349        
cufflinks 0.467        
cufflinks 0.771       High
cufflinks 0.465        
cufflinks 0.547        
cufflinks 0.66       High

0 Strain