Gene : Bradi5g19030 B. distachyon v3.1
Defline:  (1 of 3) K14016 - ubiquitin fusion degradation protein 1 (UFD1) Genomic Order:  2201
Name:  ? Bradi5g19030 Secondary Identifier:  ? PAC:32808299
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi5g19030 0.5kb upstream 0.5kb upstream 4592 true Bd5: 22234006-22238597 Brachypodium distachyon
Bradi5g19030 0.5kb upstream 0.5kb upstream 500 false Bd5: 22234006-22234505 Brachypodium distachyon
Bradi5g19030 0.5kb downstream 0.5kb downstream 4592 true Bd5: 22234506-22239097 Brachypodium distachyon
Bradi5g19030 0.5kb downstream 0.5kb downstream 500 false Bd5: 22238598-22239097 Brachypodium distachyon
Bradi5g19030 1.0kb upstream 1.0kb upstream 5092 true Bd5: 22233506-22238597 Brachypodium distachyon
Bradi5g19030 1.0kb upstream 1.0kb upstream 1000 false Bd5: 22233506-22234505 Brachypodium distachyon
Bradi5g19030 1.0kb downstream 1.0kb downstream 5092 true Bd5: 22234506-22239597 Brachypodium distachyon
Bradi5g19030 1.0kb downstream 1.0kb downstream 1000 false Bd5: 22238598-22239597 Brachypodium distachyon
Bradi5g19030 2.0kb upstream 2.0kb upstream 6092 true Bd5: 22232506-22238597 Brachypodium distachyon
Bradi5g19030 2.0kb upstream 2.0kb upstream 2000 false Bd5: 22232506-22234505 Brachypodium distachyon
Bradi5g19030 2.0kb downstream 2.0kb downstream 6092 true Bd5: 22234506-22240597 Brachypodium distachyon
Bradi5g19030 2.0kb downstream 2.0kb downstream 2000 false Bd5: 22238598-22240597 Brachypodium distachyon
Bradi5g19030 5.0kb upstream 5.0kb upstream 9092 true Bd5: 22229506-22238597 Brachypodium distachyon
Bradi5g19030 5.0kb upstream 5.0kb upstream 5000 false Bd5: 22229506-22234505 Brachypodium distachyon
Bradi5g19030 5.0kb downstream 5.0kb downstream 9092 true Bd5: 22234506-22243597 Brachypodium distachyon
Bradi5g19030 5.0kb downstream 5.0kb downstream 5000 false Bd5: 22238598-22243597 Brachypodium distachyon
Bradi5g19030 10.0kb upstream 10.0kb upstream 14092 true Bd5: 22224506-22238597 Brachypodium distachyon
Bradi5g19030 10.0kb upstream 10.0kb upstream 10000 false Bd5: 22224506-22234505 Brachypodium distachyon
Bradi5g19030 10.0kb downstream 10.0kb downstream 14092 true Bd5: 22234506-22248597 Brachypodium distachyon
Bradi5g19030 10.0kb downstream 10.0kb downstream 10000 false Bd5: 22238598-22248597 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124583221 5269 Grass View MSA
122047756 5273 Angiosperm View MSA
123429180 5275 Viridiplantae View MSA
121346012 5274 Embryophyte View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.79        
cufflinks 4.467        
cufflinks 4.111        
cufflinks 4.287        
cufflinks 3.197       Low
cufflinks 4.339        
cufflinks 4.447        
cufflinks 4.073        
cufflinks 3.978        
cufflinks 2.811       Low
cufflinks 5.257       High
cufflinks 3.883        
cufflinks 4.145        
cufflinks 4.502        
cufflinks 3.387        
cufflinks 4.632        
cufflinks 3.439        
cufflinks 6.699       High
cufflinks 3.516        
cufflinks 2.662       Low
cufflinks 4.936        
cufflinks 3.262        
cufflinks 3.686        
cufflinks 4.205        
cufflinks 3.95        
cufflinks 3.98        
cufflinks 6.109       High
cufflinks 3.508        
cufflinks 3.628        
cufflinks 4.046        

0 Strain