Gene : Bradi5g19017 B. distachyon v3.1
Defline:  (1 of 16) PF07714//PF08263//PF13855 - Protein tyrosine kinase (Pkinase_Tyr) // Leucine rich repeat N-terminal domain (LRRNT_2) // Leucine rich repeat (LRR_8) Genomic Order:  2200
Name:  ? Bradi5g19017 Secondary Identifier:  ? PAC:32809449
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi5g19017 0.5kb upstream 0.5kb upstream 4837 true Bd5: 22226870-22231706 Brachypodium distachyon
Bradi5g19017 0.5kb upstream 0.5kb upstream 500 false Bd5: 22226870-22227369 Brachypodium distachyon
Bradi5g19017 0.5kb downstream 0.5kb downstream 4837 true Bd5: 22227370-22232206 Brachypodium distachyon
Bradi5g19017 0.5kb downstream 0.5kb downstream 500 false Bd5: 22231707-22232206 Brachypodium distachyon
Bradi5g19017 1.0kb upstream 1.0kb upstream 5337 true Bd5: 22226370-22231706 Brachypodium distachyon
Bradi5g19017 1.0kb upstream 1.0kb upstream 1000 false Bd5: 22226370-22227369 Brachypodium distachyon
Bradi5g19017 1.0kb downstream 1.0kb downstream 5337 true Bd5: 22227370-22232706 Brachypodium distachyon
Bradi5g19017 1.0kb downstream 1.0kb downstream 1000 false Bd5: 22231707-22232706 Brachypodium distachyon
Bradi5g19017 2.0kb upstream 2.0kb upstream 6337 true Bd5: 22225370-22231706 Brachypodium distachyon
Bradi5g19017 2.0kb upstream 2.0kb upstream 2000 false Bd5: 22225370-22227369 Brachypodium distachyon
Bradi5g19017 2.0kb downstream 2.0kb downstream 6337 true Bd5: 22227370-22233706 Brachypodium distachyon
Bradi5g19017 2.0kb downstream 2.0kb downstream 2000 false Bd5: 22231707-22233706 Brachypodium distachyon
Bradi5g19017 5.0kb upstream 5.0kb upstream 9337 true Bd5: 22222370-22231706 Brachypodium distachyon
Bradi5g19017 5.0kb upstream 5.0kb upstream 5000 false Bd5: 22222370-22227369 Brachypodium distachyon
Bradi5g19017 5.0kb downstream 5.0kb downstream 9337 true Bd5: 22227370-22236706 Brachypodium distachyon
Bradi5g19017 5.0kb downstream 5.0kb downstream 5000 false Bd5: 22231707-22236706 Brachypodium distachyon
Bradi5g19017 10.0kb upstream 10.0kb upstream 14337 true Bd5: 22217370-22231706 Brachypodium distachyon
Bradi5g19017 10.0kb upstream 10.0kb upstream 10000 false Bd5: 22217370-22227369 Brachypodium distachyon
Bradi5g19017 10.0kb downstream 10.0kb downstream 14337 true Bd5: 22227370-22241706 Brachypodium distachyon
Bradi5g19017 10.0kb downstream 10.0kb downstream 10000 false Bd5: 22231707-22241706 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124585992 5269 Grass View MSA
122043000 5273 Angiosperm View MSA
123429169 5275 Viridiplantae View MSA
121350177 5274 Embryophyte View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.91        
cufflinks 7.395        
cufflinks 6.792        
cufflinks 4.68        
cufflinks 0.293        
cufflinks 6.188        
cufflinks 6.934        
cufflinks 4.864        
cufflinks 5.531        
cufflinks 2.528        
cufflinks 0.002     Low Low
cufflinks 4.461        
cufflinks 0.004     Low Low
cufflinks 0.002     Low Low
cufflinks 0.496        
cufflinks 7.136        
cufflinks 2.964        
cufflinks 14.744     High High
cufflinks 2.238        
cufflinks 0.021     Low Low
cufflinks 3.84        
cufflinks 5.686        
cufflinks 3.951        
cufflinks 3.144        
cufflinks 4.151        
cufflinks 4.81        
cufflinks 0.015     Low Low
cufflinks 4.351        
cufflinks 4.853        
cufflinks 7.264        

0 Strain