Gene : Bradi1g34170 B. distachyon v3.1
Defline:  (1 of 3) K03257 - translation initiation factor 4A (EIF4A) Genomic Order:  4361
Name:  ? Bradi1g34170 Secondary Identifier:  ? PAC:32801820
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi1g34170 0.5kb upstream 0.5kb upstream 3741 true Bd1: 29871891-29875631 Brachypodium distachyon
Bradi1g34170 0.5kb upstream 0.5kb upstream 500 false Bd1: 29875132-29875631 Brachypodium distachyon
Bradi1g34170 0.5kb downstream 0.5kb downstream 3741 true Bd1: 29871391-29875131 Brachypodium distachyon
Bradi1g34170 0.5kb downstream 0.5kb downstream 500 false Bd1: 29871391-29871890 Brachypodium distachyon
Bradi1g34170 1.0kb upstream 1.0kb upstream 4241 true Bd1: 29871891-29876131 Brachypodium distachyon
Bradi1g34170 1.0kb upstream 1.0kb upstream 1000 false Bd1: 29875132-29876131 Brachypodium distachyon
Bradi1g34170 1.0kb downstream 1.0kb downstream 4241 true Bd1: 29870891-29875131 Brachypodium distachyon
Bradi1g34170 1.0kb downstream 1.0kb downstream 1000 false Bd1: 29870891-29871890 Brachypodium distachyon
Bradi1g34170 2.0kb upstream 2.0kb upstream 5241 true Bd1: 29871891-29877131 Brachypodium distachyon
Bradi1g34170 2.0kb upstream 2.0kb upstream 2000 false Bd1: 29875132-29877131 Brachypodium distachyon
Bradi1g34170 2.0kb downstream 2.0kb downstream 5241 true Bd1: 29869891-29875131 Brachypodium distachyon
Bradi1g34170 2.0kb downstream 2.0kb downstream 2000 false Bd1: 29869891-29871890 Brachypodium distachyon
Bradi1g34170 5.0kb upstream 5.0kb upstream 8241 true Bd1: 29871891-29880131 Brachypodium distachyon
Bradi1g34170 5.0kb upstream 5.0kb upstream 5000 false Bd1: 29875132-29880131 Brachypodium distachyon
Bradi1g34170 5.0kb downstream 5.0kb downstream 8241 true Bd1: 29866891-29875131 Brachypodium distachyon
Bradi1g34170 5.0kb downstream 5.0kb downstream 5000 false Bd1: 29866891-29871890 Brachypodium distachyon
Bradi1g34170 10.0kb upstream 10.0kb upstream 13241 true Bd1: 29871891-29885131 Brachypodium distachyon
Bradi1g34170 10.0kb upstream 10.0kb upstream 10000 false Bd1: 29875132-29885131 Brachypodium distachyon
Bradi1g34170 10.0kb downstream 10.0kb downstream 13241 true Bd1: 29861891-29875131 Brachypodium distachyon
Bradi1g34170 10.0kb downstream 10.0kb downstream 10000 false Bd1: 29861891-29871890 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124582255 5269 Grass View MSA
122046690 5273 Angiosperm View MSA
121345295 5274 Embryophyte View MSA
123427522 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 76.928     High  
cufflinks 91.21     High  
cufflinks 106.28     High  
cufflinks 73.992     High  
cufflinks 83.025     High  
cufflinks 84.429     High  
cufflinks 83.167     High  
cufflinks 79.23     High  
cufflinks 75.929     High  
cufflinks 73.76     High  
cufflinks 44.277     High Low
cufflinks 82.348     High  
cufflinks 31.443     High Low
cufflinks 33.867     High Low
cufflinks 57.095     High  
cufflinks 102.424     High  
cufflinks 92.997     High  
cufflinks 212.6     High High
cufflinks 116.498     High  
cufflinks 102.852     High  
cufflinks 108.075     High  
cufflinks 101.032     High  
cufflinks 70.001     High  
cufflinks 66.901     High  
cufflinks 67.368     High  
cufflinks 94.105     High  
cufflinks 42.754     High Low
cufflinks 98.733     High  
cufflinks 101.678     High  
cufflinks 118.824     High  

0 Strain