Gene : Bradi1g31391 B. distachyon v3.1
Defline:  (1 of 17) PF03110 - SBP domain (SBP) Genomic Order:  3979
Name:  ? Bradi1g31391 Secondary Identifier:  ? PAC:32797716
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi1g31391 0.5kb upstream 0.5kb upstream 3622 true Bd1: 26968469-26972090 Brachypodium distachyon
Bradi1g31391 0.5kb upstream 0.5kb upstream 500 false Bd1: 26968469-26968968 Brachypodium distachyon
Bradi1g31391 0.5kb downstream 0.5kb downstream 3622 true Bd1: 26968969-26972590 Brachypodium distachyon
Bradi1g31391 0.5kb downstream 0.5kb downstream 500 false Bd1: 26972091-26972590 Brachypodium distachyon
Bradi1g31391 1.0kb upstream 1.0kb upstream 4122 true Bd1: 26967969-26972090 Brachypodium distachyon
Bradi1g31391 1.0kb upstream 1.0kb upstream 1000 false Bd1: 26967969-26968968 Brachypodium distachyon
Bradi1g31391 1.0kb downstream 1.0kb downstream 4122 true Bd1: 26968969-26973090 Brachypodium distachyon
Bradi1g31391 1.0kb downstream 1.0kb downstream 1000 false Bd1: 26972091-26973090 Brachypodium distachyon
Bradi1g31391 2.0kb upstream 2.0kb upstream 5122 true Bd1: 26966969-26972090 Brachypodium distachyon
Bradi1g31391 2.0kb upstream 2.0kb upstream 2000 false Bd1: 26966969-26968968 Brachypodium distachyon
Bradi1g31391 2.0kb downstream 2.0kb downstream 5122 true Bd1: 26968969-26974090 Brachypodium distachyon
Bradi1g31391 2.0kb downstream 2.0kb downstream 2000 false Bd1: 26972091-26974090 Brachypodium distachyon
Bradi1g31391 5.0kb upstream 5.0kb upstream 8122 true Bd1: 26963969-26972090 Brachypodium distachyon
Bradi1g31391 5.0kb upstream 5.0kb upstream 5000 false Bd1: 26963969-26968968 Brachypodium distachyon
Bradi1g31391 5.0kb downstream 5.0kb downstream 8122 true Bd1: 26968969-26977090 Brachypodium distachyon
Bradi1g31391 5.0kb downstream 5.0kb downstream 5000 false Bd1: 26972091-26977090 Brachypodium distachyon
Bradi1g31391 10.0kb upstream 10.0kb upstream 13122 true Bd1: 26958969-26972090 Brachypodium distachyon
Bradi1g31391 10.0kb upstream 10.0kb upstream 10000 false Bd1: 26958969-26968968 Brachypodium distachyon
Bradi1g31391 10.0kb downstream 10.0kb downstream 13122 true Bd1: 26968969-26982090 Brachypodium distachyon
Bradi1g31391 10.0kb downstream 10.0kb downstream 10000 false Bd1: 26972091-26982090 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124577076 5269 Grass View MSA
122042410 5273 Angiosperm View MSA
123428908 5275 Viridiplantae View MSA
121309962 5274 Embryophyte View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.257        
cufflinks 3.615        
cufflinks 3.807        
cufflinks 2.818        
cufflinks 1.518        
cufflinks 3.213        
cufflinks 3.405        
cufflinks 3.331        
cufflinks 2.581        
cufflinks 1.762        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 2.452        
cufflinks 0.004     Low Low
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 1.386        
cufflinks 4.374        
cufflinks 3.067        
cufflinks 1.432        
cufflinks 4.336        
cufflinks 0.447       Low
cufflinks 1.627        
cufflinks 3.25        
cufflinks 2.769        
cufflinks 3.389        
cufflinks 2.311        
cufflinks 3.141        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 2.807        
cufflinks 3.403        
cufflinks 5.411        

0 Strain