Gene : Bradi1g37290 B. distachyon v3.1
Defline:  (1 of 2) PTHR10625//PTHR10625:SF127 - HISTONE DEACETYLASE // SUBFAMILY NOT NAMED Genomic Order:  4758
Name:  ? Bradi1g37290 Secondary Identifier:  ? PAC:32795699
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi1g37290 0.5kb upstream 0.5kb upstream 8508 true Bd1: 33218446-33226953 Brachypodium distachyon
Bradi1g37290 0.5kb upstream 0.5kb upstream 500 false Bd1: 33218446-33218945 Brachypodium distachyon
Bradi1g37290 0.5kb downstream 0.5kb downstream 8508 true Bd1: 33218946-33227453 Brachypodium distachyon
Bradi1g37290 0.5kb downstream 0.5kb downstream 500 false Bd1: 33226954-33227453 Brachypodium distachyon
Bradi1g37290 1.0kb upstream 1.0kb upstream 9008 true Bd1: 33217946-33226953 Brachypodium distachyon
Bradi1g37290 1.0kb upstream 1.0kb upstream 1000 false Bd1: 33217946-33218945 Brachypodium distachyon
Bradi1g37290 1.0kb downstream 1.0kb downstream 9008 true Bd1: 33218946-33227953 Brachypodium distachyon
Bradi1g37290 1.0kb downstream 1.0kb downstream 1000 false Bd1: 33226954-33227953 Brachypodium distachyon
Bradi1g37290 2.0kb upstream 2.0kb upstream 10008 true Bd1: 33216946-33226953 Brachypodium distachyon
Bradi1g37290 2.0kb upstream 2.0kb upstream 2000 false Bd1: 33216946-33218945 Brachypodium distachyon
Bradi1g37290 2.0kb downstream 2.0kb downstream 10008 true Bd1: 33218946-33228953 Brachypodium distachyon
Bradi1g37290 2.0kb downstream 2.0kb downstream 2000 false Bd1: 33226954-33228953 Brachypodium distachyon
Bradi1g37290 5.0kb upstream 5.0kb upstream 13008 true Bd1: 33213946-33226953 Brachypodium distachyon
Bradi1g37290 5.0kb upstream 5.0kb upstream 5000 false Bd1: 33213946-33218945 Brachypodium distachyon
Bradi1g37290 5.0kb downstream 5.0kb downstream 13008 true Bd1: 33218946-33231953 Brachypodium distachyon
Bradi1g37290 5.0kb downstream 5.0kb downstream 5000 false Bd1: 33226954-33231953 Brachypodium distachyon
Bradi1g37290 10.0kb upstream 10.0kb upstream 18008 true Bd1: 33208946-33226953 Brachypodium distachyon
Bradi1g37290 10.0kb upstream 10.0kb upstream 10000 false Bd1: 33208946-33218945 Brachypodium distachyon
Bradi1g37290 10.0kb downstream 10.0kb downstream 18008 true Bd1: 33218946-33236953 Brachypodium distachyon
Bradi1g37290 10.0kb downstream 10.0kb downstream 10000 false Bd1: 33226954-33236953 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124586021 5269 Grass View MSA
122042529 5273 Angiosperm View MSA
123429001 5275 Viridiplantae View MSA
121349926 5274 Embryophyte View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.293        
cufflinks 1.417        
cufflinks 1.371        
cufflinks 1.284        
cufflinks 0.715        
cufflinks 1.234        
cufflinks 1.182        
cufflinks 1.17        
cufflinks 1.159        
cufflinks 1.021        
cufflinks 0.776        
cufflinks 0.954        
cufflinks 0.492       Low
cufflinks 0.53       Low
cufflinks 0.813        
cufflinks 1.308        
cufflinks 1.029        
cufflinks 1.967       High
cufflinks 1.193        
cufflinks 0.596       Low
cufflinks 1.161        
cufflinks 1.326        
cufflinks 1.087        
cufflinks 0.931        
cufflinks 1.139        
cufflinks 1.17        
cufflinks 0.623       Low
cufflinks 1.248        
cufflinks 1.173        
cufflinks 1.516       High

0 Strain