Gene : Bradi5g26490 B. distachyon v3.1
Defline:  (1 of 3) PTHR10774//PTHR10774:SF58 - EXTENDED SYNAPTOTAGMIN-RELATED Genomic Order:  3156
Name:  ? Bradi5g26490 Secondary Identifier:  ? PAC:32810430
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi5g26490 0.5kb upstream 0.5kb upstream 2321 true Bd5: 27648611-27650931 Brachypodium distachyon
Bradi5g26490 0.5kb upstream 0.5kb upstream 500 false Bd5: 27648611-27649110 Brachypodium distachyon
Bradi5g26490 0.5kb downstream 0.5kb downstream 2321 true Bd5: 27649111-27651431 Brachypodium distachyon
Bradi5g26490 0.5kb downstream 0.5kb downstream 500 false Bd5: 27650932-27651431 Brachypodium distachyon
Bradi5g26490 1.0kb upstream 1.0kb upstream 2821 true Bd5: 27648111-27650931 Brachypodium distachyon
Bradi5g26490 1.0kb upstream 1.0kb upstream 1000 false Bd5: 27648111-27649110 Brachypodium distachyon
Bradi5g26490 1.0kb downstream 1.0kb downstream 2821 true Bd5: 27649111-27651931 Brachypodium distachyon
Bradi5g26490 1.0kb downstream 1.0kb downstream 1000 false Bd5: 27650932-27651931 Brachypodium distachyon
Bradi5g26490 2.0kb upstream 2.0kb upstream 3821 true Bd5: 27647111-27650931 Brachypodium distachyon
Bradi5g26490 2.0kb upstream 2.0kb upstream 2000 false Bd5: 27647111-27649110 Brachypodium distachyon
Bradi5g26490 2.0kb downstream 2.0kb downstream 3821 true Bd5: 27649111-27652931 Brachypodium distachyon
Bradi5g26490 2.0kb downstream 2.0kb downstream 2000 false Bd5: 27650932-27652931 Brachypodium distachyon
Bradi5g26490 5.0kb upstream 5.0kb upstream 6821 true Bd5: 27644111-27650931 Brachypodium distachyon
Bradi5g26490 5.0kb upstream 5.0kb upstream 5000 false Bd5: 27644111-27649110 Brachypodium distachyon
Bradi5g26490 5.0kb downstream 5.0kb downstream 6821 true Bd5: 27649111-27655931 Brachypodium distachyon
Bradi5g26490 5.0kb downstream 5.0kb downstream 5000 false Bd5: 27650932-27655931 Brachypodium distachyon
Bradi5g26490 10.0kb upstream 10.0kb upstream 11821 true Bd5: 27639111-27650931 Brachypodium distachyon
Bradi5g26490 10.0kb upstream 10.0kb upstream 10000 false Bd5: 27639111-27649110 Brachypodium distachyon
Bradi5g26490 10.0kb downstream 10.0kb downstream 11821 true Bd5: 27649111-27660931 Brachypodium distachyon
Bradi5g26490 10.0kb downstream 10.0kb downstream 10000 false Bd5: 27650932-27660931 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124568421 5269 Grass View MSA
122043310 5273 Angiosperm View MSA
121351694 5274 Embryophyte View MSA
123426112 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.583        
cufflinks 0.348        
cufflinks 0.592        
cufflinks 0.609        
cufflinks 0.771        
cufflinks 0.855        
cufflinks 0.557        
cufflinks 1.052        
cufflinks 1.122        
cufflinks 0.366        
cufflinks 2.455       High
cufflinks 0.732        
cufflinks 1.09        
cufflinks 2.145       High
cufflinks 1.082        
cufflinks 0.218       Low
cufflinks 0.615        
cufflinks 2.996       High
cufflinks 0.147     Low Low
cufflinks 0.378        
cufflinks 0.673        
cufflinks 0.436        
cufflinks 0.862        
cufflinks 1.063        
cufflinks 1.024        
cufflinks 0.602        
cufflinks 3.796       High
cufflinks 0.596        
cufflinks 0.544        
cufflinks 0.155       Low

0 Strain