Gene : Bradi5g24930 B. distachyon v3.1
Defline:  (1 of 1) PTHR10192 - MOLYBDOPTERIN BIOSYNTHESIS PROTEIN Genomic Order:  2961
Name:  ? Bradi5g24930 Secondary Identifier:  ? PAC:32807535
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Bdistachyon PWY-6823 Brachypodium distachyon pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi5g24930 0.5kb upstream 0.5kb upstream 5084 true Bd5: 26629308-26634391 Brachypodium distachyon
Bradi5g24930 0.5kb upstream 0.5kb upstream 500 false Bd5: 26629308-26629807 Brachypodium distachyon
Bradi5g24930 0.5kb downstream 0.5kb downstream 5084 true Bd5: 26629808-26634891 Brachypodium distachyon
Bradi5g24930 0.5kb downstream 0.5kb downstream 500 false Bd5: 26634392-26634891 Brachypodium distachyon
Bradi5g24930 1.0kb upstream 1.0kb upstream 5584 true Bd5: 26628808-26634391 Brachypodium distachyon
Bradi5g24930 1.0kb upstream 1.0kb upstream 1000 false Bd5: 26628808-26629807 Brachypodium distachyon
Bradi5g24930 1.0kb downstream 1.0kb downstream 5584 true Bd5: 26629808-26635391 Brachypodium distachyon
Bradi5g24930 1.0kb downstream 1.0kb downstream 1000 false Bd5: 26634392-26635391 Brachypodium distachyon
Bradi5g24930 2.0kb upstream 2.0kb upstream 6584 true Bd5: 26627808-26634391 Brachypodium distachyon
Bradi5g24930 2.0kb upstream 2.0kb upstream 2000 false Bd5: 26627808-26629807 Brachypodium distachyon
Bradi5g24930 2.0kb downstream 2.0kb downstream 6584 true Bd5: 26629808-26636391 Brachypodium distachyon
Bradi5g24930 2.0kb downstream 2.0kb downstream 2000 false Bd5: 26634392-26636391 Brachypodium distachyon
Bradi5g24930 5.0kb upstream 5.0kb upstream 9584 true Bd5: 26624808-26634391 Brachypodium distachyon
Bradi5g24930 5.0kb upstream 5.0kb upstream 5000 false Bd5: 26624808-26629807 Brachypodium distachyon
Bradi5g24930 5.0kb downstream 5.0kb downstream 9584 true Bd5: 26629808-26639391 Brachypodium distachyon
Bradi5g24930 5.0kb downstream 5.0kb downstream 5000 false Bd5: 26634392-26639391 Brachypodium distachyon
Bradi5g24930 10.0kb upstream 10.0kb upstream 14584 true Bd5: 26619808-26634391 Brachypodium distachyon
Bradi5g24930 10.0kb upstream 10.0kb upstream 10000 false Bd5: 26619808-26629807 Brachypodium distachyon
Bradi5g24930 10.0kb downstream 10.0kb downstream 14584 true Bd5: 26629808-26644391 Brachypodium distachyon
Bradi5g24930 10.0kb downstream 10.0kb downstream 10000 false Bd5: 26634392-26644391 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124582147 5269 Grass View MSA
122044086 5273 Angiosperm View MSA
121347061 5274 Embryophyte View MSA
123428395 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.723        
cufflinks 5.098        
cufflinks 6.011        
cufflinks 4.704        
cufflinks 4.045        
cufflinks 4.485        
cufflinks 4.535        
cufflinks 4.972        
cufflinks 4.652        
cufflinks 4.2        
cufflinks 5.484        
cufflinks 4.73        
cufflinks 4.059        
cufflinks 3.997        
cufflinks 4.077        
cufflinks 4.757        
cufflinks 3.915        
cufflinks 7.288       High
cufflinks 6.393       High
cufflinks 4.156        
cufflinks 3.348       Low
cufflinks 6.195        
cufflinks 4.962        
cufflinks 3.935        
cufflinks 3.791        
cufflinks 5.514        
cufflinks 4.656        
cufflinks 5.601        
cufflinks 5.536        
cufflinks 4.159        

0 Strain