Gene : Bradi5g25620 B. distachyon v3.1
Defline:  (1 of 1) PTHR10994:SF77 - RETICULON-LIKE PROTEIN B10-RELATED Genomic Order:  3047
Name:  ? Bradi5g25620 Secondary Identifier:  ? PAC:32809050
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi5g25620 0.5kb upstream 0.5kb upstream 3954 true Bd5: 27032809-27036762 Brachypodium distachyon
Bradi5g25620 0.5kb upstream 0.5kb upstream 500 false Bd5: 27032809-27033308 Brachypodium distachyon
Bradi5g25620 0.5kb downstream 0.5kb downstream 3954 true Bd5: 27033309-27037262 Brachypodium distachyon
Bradi5g25620 0.5kb downstream 0.5kb downstream 500 false Bd5: 27036763-27037262 Brachypodium distachyon
Bradi5g25620 1.0kb upstream 1.0kb upstream 4454 true Bd5: 27032309-27036762 Brachypodium distachyon
Bradi5g25620 1.0kb upstream 1.0kb upstream 1000 false Bd5: 27032309-27033308 Brachypodium distachyon
Bradi5g25620 1.0kb downstream 1.0kb downstream 4454 true Bd5: 27033309-27037762 Brachypodium distachyon
Bradi5g25620 1.0kb downstream 1.0kb downstream 1000 false Bd5: 27036763-27037762 Brachypodium distachyon
Bradi5g25620 2.0kb upstream 2.0kb upstream 5454 true Bd5: 27031309-27036762 Brachypodium distachyon
Bradi5g25620 2.0kb upstream 2.0kb upstream 2000 false Bd5: 27031309-27033308 Brachypodium distachyon
Bradi5g25620 2.0kb downstream 2.0kb downstream 5454 true Bd5: 27033309-27038762 Brachypodium distachyon
Bradi5g25620 2.0kb downstream 2.0kb downstream 2000 false Bd5: 27036763-27038762 Brachypodium distachyon
Bradi5g25620 5.0kb upstream 5.0kb upstream 8454 true Bd5: 27028309-27036762 Brachypodium distachyon
Bradi5g25620 5.0kb upstream 5.0kb upstream 5000 false Bd5: 27028309-27033308 Brachypodium distachyon
Bradi5g25620 5.0kb downstream 5.0kb downstream 8454 true Bd5: 27033309-27041762 Brachypodium distachyon
Bradi5g25620 5.0kb downstream 5.0kb downstream 5000 false Bd5: 27036763-27041762 Brachypodium distachyon
Bradi5g25620 10.0kb upstream 10.0kb upstream 13454 true Bd5: 27023309-27036762 Brachypodium distachyon
Bradi5g25620 10.0kb upstream 10.0kb upstream 10000 false Bd5: 27023309-27033308 Brachypodium distachyon
Bradi5g25620 10.0kb downstream 10.0kb downstream 13454 true Bd5: 27033309-27046762 Brachypodium distachyon
Bradi5g25620 10.0kb downstream 10.0kb downstream 10000 false Bd5: 27036763-27046762 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124569603 5269 Grass View MSA
122047418 5273 Angiosperm View MSA
123429002 5275 Viridiplantae View MSA
121351639 5274 Embryophyte View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.405        
cufflinks 2.902        
cufflinks 2.747        
cufflinks 3.303        
cufflinks 1.846        
cufflinks 2.581        
cufflinks 3.056        
cufflinks 2.803        
cufflinks 2.831        
cufflinks 3.87        
cufflinks 1.458       Low
cufflinks 2.6        
cufflinks 1.487       Low
cufflinks 1.753        
cufflinks 1.814        
cufflinks 2.785        
cufflinks 3.101        
cufflinks 5.62       High
cufflinks 4.554       High
cufflinks 0.95       Low
cufflinks 5.967       High
cufflinks 3.157        
cufflinks 2.829        
cufflinks 2.952        
cufflinks 3.287        
cufflinks 3.791        
cufflinks 2.293        
cufflinks 3.092        
cufflinks 3.004        
cufflinks 4.576       High

0 Strain