Gene : Bradi1g38680 B. distachyon v3.1
Defline:  (1 of 1) PTHR10217//PTHR10217:SF524 - VOLTAGE AND LIGAND GATED POTASSIUM CHANNEL // SUBFAMILY NOT NAMED Genomic Order:  4938
Name:  ? Bradi1g38680 Secondary Identifier:  ? PAC:32801500
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi1g38680 0.5kb upstream 0.5kb upstream 8473 true Bd1: 35074461-35082933 Brachypodium distachyon
Bradi1g38680 0.5kb upstream 0.5kb upstream 500 false Bd1: 35074461-35074960 Brachypodium distachyon
Bradi1g38680 0.5kb downstream 0.5kb downstream 8473 true Bd1: 35074961-35083433 Brachypodium distachyon
Bradi1g38680 0.5kb downstream 0.5kb downstream 500 false Bd1: 35082934-35083433 Brachypodium distachyon
Bradi1g38680 1.0kb upstream 1.0kb upstream 8973 true Bd1: 35073961-35082933 Brachypodium distachyon
Bradi1g38680 1.0kb upstream 1.0kb upstream 1000 false Bd1: 35073961-35074960 Brachypodium distachyon
Bradi1g38680 1.0kb downstream 1.0kb downstream 8973 true Bd1: 35074961-35083933 Brachypodium distachyon
Bradi1g38680 1.0kb downstream 1.0kb downstream 1000 false Bd1: 35082934-35083933 Brachypodium distachyon
Bradi1g38680 2.0kb upstream 2.0kb upstream 9973 true Bd1: 35072961-35082933 Brachypodium distachyon
Bradi1g38680 2.0kb upstream 2.0kb upstream 2000 false Bd1: 35072961-35074960 Brachypodium distachyon
Bradi1g38680 2.0kb downstream 2.0kb downstream 9973 true Bd1: 35074961-35084933 Brachypodium distachyon
Bradi1g38680 2.0kb downstream 2.0kb downstream 2000 false Bd1: 35082934-35084933 Brachypodium distachyon
Bradi1g38680 5.0kb upstream 5.0kb upstream 12973 true Bd1: 35069961-35082933 Brachypodium distachyon
Bradi1g38680 5.0kb upstream 5.0kb upstream 5000 false Bd1: 35069961-35074960 Brachypodium distachyon
Bradi1g38680 5.0kb downstream 5.0kb downstream 12973 true Bd1: 35074961-35087933 Brachypodium distachyon
Bradi1g38680 5.0kb downstream 5.0kb downstream 5000 false Bd1: 35082934-35087933 Brachypodium distachyon
Bradi1g38680 10.0kb upstream 10.0kb upstream 17973 true Bd1: 35064961-35082933 Brachypodium distachyon
Bradi1g38680 10.0kb upstream 10.0kb upstream 10000 false Bd1: 35064961-35074960 Brachypodium distachyon
Bradi1g38680 10.0kb downstream 10.0kb downstream 17973 true Bd1: 35074961-35092933 Brachypodium distachyon
Bradi1g38680 10.0kb downstream 10.0kb downstream 10000 false Bd1: 35082934-35092933 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124585108 5269 Grass View MSA
122044448 5273 Angiosperm View MSA
121351754 5274 Embryophyte View MSA
123428762 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.843        
cufflinks 1.682        
cufflinks 2.357       High
cufflinks 1.522        
cufflinks 0.383       Low
cufflinks 1.444        
cufflinks 1.281        
cufflinks 1.238        
cufflinks 1.354        
cufflinks 1.46        
cufflinks 2.344       High
cufflinks 1.809        
cufflinks 2.118        
cufflinks 1.746        
cufflinks 1.386        
cufflinks 1.525        
cufflinks 0.698        
cufflinks 0.848        
cufflinks 0.461       Low
cufflinks 0.272       Low
cufflinks 0.925        
cufflinks 2.697       High
cufflinks 1.25        
cufflinks 1.316        
cufflinks 1.239        
cufflinks 2.409       High
cufflinks 3.08       High
cufflinks 2.675       High
cufflinks 2.622       High
cufflinks 0.929        

0 Strain