Gene : Bradi1g38630 B. distachyon v3.1
Defline:  (1 of 1) PTHR34550:SF1 - 30S RIBOSOMAL PROTEIN S31, CHLOROPLASTIC Genomic Order:  4931
Name:  ? Bradi1g38630 Secondary Identifier:  ? PAC:32805459
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi1g38630 0.5kb upstream 0.5kb upstream 2487 true Bd1: 34983387-34985873 Brachypodium distachyon
Bradi1g38630 0.5kb upstream 0.5kb upstream 500 false Bd1: 34983387-34983886 Brachypodium distachyon
Bradi1g38630 0.5kb downstream 0.5kb downstream 2487 true Bd1: 34983887-34986373 Brachypodium distachyon
Bradi1g38630 0.5kb downstream 0.5kb downstream 500 false Bd1: 34985874-34986373 Brachypodium distachyon
Bradi1g38630 1.0kb upstream 1.0kb upstream 2987 true Bd1: 34982887-34985873 Brachypodium distachyon
Bradi1g38630 1.0kb upstream 1.0kb upstream 1000 false Bd1: 34982887-34983886 Brachypodium distachyon
Bradi1g38630 1.0kb downstream 1.0kb downstream 2987 true Bd1: 34983887-34986873 Brachypodium distachyon
Bradi1g38630 1.0kb downstream 1.0kb downstream 1000 false Bd1: 34985874-34986873 Brachypodium distachyon
Bradi1g38630 2.0kb upstream 2.0kb upstream 3987 true Bd1: 34981887-34985873 Brachypodium distachyon
Bradi1g38630 2.0kb upstream 2.0kb upstream 2000 false Bd1: 34981887-34983886 Brachypodium distachyon
Bradi1g38630 2.0kb downstream 2.0kb downstream 3987 true Bd1: 34983887-34987873 Brachypodium distachyon
Bradi1g38630 2.0kb downstream 2.0kb downstream 2000 false Bd1: 34985874-34987873 Brachypodium distachyon
Bradi1g38630 5.0kb upstream 5.0kb upstream 6987 true Bd1: 34978887-34985873 Brachypodium distachyon
Bradi1g38630 5.0kb upstream 5.0kb upstream 5000 false Bd1: 34978887-34983886 Brachypodium distachyon
Bradi1g38630 5.0kb downstream 5.0kb downstream 6987 true Bd1: 34983887-34990873 Brachypodium distachyon
Bradi1g38630 5.0kb downstream 5.0kb downstream 5000 false Bd1: 34985874-34990873 Brachypodium distachyon
Bradi1g38630 10.0kb upstream 10.0kb upstream 11987 true Bd1: 34973887-34985873 Brachypodium distachyon
Bradi1g38630 10.0kb upstream 10.0kb upstream 10000 false Bd1: 34973887-34983886 Brachypodium distachyon
Bradi1g38630 10.0kb downstream 10.0kb downstream 11987 true Bd1: 34983887-34995873 Brachypodium distachyon
Bradi1g38630 10.0kb downstream 10.0kb downstream 10000 false Bd1: 34985874-34995873 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124574896 5269 Grass View MSA
122046754 5273 Angiosperm View MSA
121345882 5274 Embryophyte View MSA
123380282 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 75.284     High  
cufflinks 64.77     High  
cufflinks 61.419     High  
cufflinks 72.162     High  
cufflinks 43.185     High  
cufflinks 51.742     High  
cufflinks 65.107     High  
cufflinks 48.241     High  
cufflinks 43.699     High  
cufflinks 60.013     High  
cufflinks 18.325     High  
cufflinks 48.438     High  
cufflinks 20.623     High  
cufflinks 21.206     High  
cufflinks 55.691     High  
cufflinks 64.302     High  
cufflinks 78.794     High  
cufflinks 5.338       Low
cufflinks 64.368     High  
cufflinks 7.346       Low
cufflinks 32.884     High  
cufflinks 46.611     High  
cufflinks 39.818     High  
cufflinks 41.503     High  
cufflinks 51.318     High  
cufflinks 56.76     High  
cufflinks 10.485     High Low
cufflinks 53.228     High  
cufflinks 54.788     High  
cufflinks 61.236     High  

0 Strain