Gene : Bradi5g22340 B. distachyon v3.1
Defline:  (1 of 2) K00999 - CDP-diacylglycerol--inositol 3-phosphatidyltransferase (CDIPT) Genomic Order:  2611
Name:  ? Bradi5g22340 Secondary Identifier:  ? PAC:32809062
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Bdistachyon PWY-6351 Brachypodium distachyon pathologic  
Bdistachyon PWY-6352 Brachypodium distachyon pathologic  
Bdistachyon PWY-7625 Brachypodium distachyon pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi5g22340 0.5kb upstream 0.5kb upstream 4173 true Bd5: 24905219-24909391 Brachypodium distachyon
Bradi5g22340 0.5kb upstream 0.5kb upstream 500 false Bd5: 24905219-24905718 Brachypodium distachyon
Bradi5g22340 0.5kb downstream 0.5kb downstream 4173 true Bd5: 24905719-24909891 Brachypodium distachyon
Bradi5g22340 0.5kb downstream 0.5kb downstream 500 false Bd5: 24909392-24909891 Brachypodium distachyon
Bradi5g22340 1.0kb upstream 1.0kb upstream 4673 true Bd5: 24904719-24909391 Brachypodium distachyon
Bradi5g22340 1.0kb upstream 1.0kb upstream 1000 false Bd5: 24904719-24905718 Brachypodium distachyon
Bradi5g22340 1.0kb downstream 1.0kb downstream 4673 true Bd5: 24905719-24910391 Brachypodium distachyon
Bradi5g22340 1.0kb downstream 1.0kb downstream 1000 false Bd5: 24909392-24910391 Brachypodium distachyon
Bradi5g22340 2.0kb upstream 2.0kb upstream 5673 true Bd5: 24903719-24909391 Brachypodium distachyon
Bradi5g22340 2.0kb upstream 2.0kb upstream 2000 false Bd5: 24903719-24905718 Brachypodium distachyon
Bradi5g22340 2.0kb downstream 2.0kb downstream 5673 true Bd5: 24905719-24911391 Brachypodium distachyon
Bradi5g22340 2.0kb downstream 2.0kb downstream 2000 false Bd5: 24909392-24911391 Brachypodium distachyon
Bradi5g22340 5.0kb upstream 5.0kb upstream 8673 true Bd5: 24900719-24909391 Brachypodium distachyon
Bradi5g22340 5.0kb upstream 5.0kb upstream 5000 false Bd5: 24900719-24905718 Brachypodium distachyon
Bradi5g22340 5.0kb downstream 5.0kb downstream 8673 true Bd5: 24905719-24914391 Brachypodium distachyon
Bradi5g22340 5.0kb downstream 5.0kb downstream 5000 false Bd5: 24909392-24914391 Brachypodium distachyon
Bradi5g22340 10.0kb upstream 10.0kb upstream 13673 true Bd5: 24895719-24909391 Brachypodium distachyon
Bradi5g22340 10.0kb upstream 10.0kb upstream 10000 false Bd5: 24895719-24905718 Brachypodium distachyon
Bradi5g22340 10.0kb downstream 10.0kb downstream 13673 true Bd5: 24905719-24919391 Brachypodium distachyon
Bradi5g22340 10.0kb downstream 10.0kb downstream 10000 false Bd5: 24909392-24919391 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124584477 5269 Grass View MSA
122046136 5273 Angiosperm View MSA
121345622 5274 Embryophyte View MSA
123428790 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.375        
cufflinks 4.953        
cufflinks 5.05        
cufflinks 5.135        
cufflinks 3.353        
cufflinks 3.974        
cufflinks 3.971        
cufflinks 4.031        
cufflinks 3.684        
cufflinks 5.329        
cufflinks 2.979       Low
cufflinks 3.563        
cufflinks 3.145       Low
cufflinks 2.763       Low
cufflinks 4.171        
cufflinks 4.476        
cufflinks 5.631        
cufflinks 8.563       High
cufflinks 5.01        
cufflinks 2.033       Low
cufflinks 7.061       High
cufflinks 4.863        
cufflinks 3.909        
cufflinks 3.976        
cufflinks 4.056        
cufflinks 5.506        
cufflinks 3.392        
cufflinks 4.65        
cufflinks 4.954        
cufflinks 5.46        

0 Strain