Gene : Bradi5g27610 B. distachyon v3.1
Defline:  (1 of 3) PTHR10799//PTHR10799:SF726 - SWI/SNF-RELATED MATRIX-ASSOCIATED ACTIN-DEPENDENT REGULATOR OF CHROMATIN SUBFAMILY-RELATED // SUBFAMILY NOT NAMED Genomic Order:  3306
Name:  ? Bradi5g27610 Secondary Identifier:  ? PAC:32809073
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi5g27610 0.5kb upstream 0.5kb upstream 7803 true Bd5: 28501598-28509400 Brachypodium distachyon
Bradi5g27610 0.5kb upstream 0.5kb upstream 500 false Bd5: 28508901-28509400 Brachypodium distachyon
Bradi5g27610 0.5kb downstream 0.5kb downstream 7803 true Bd5: 28501098-28508900 Brachypodium distachyon
Bradi5g27610 0.5kb downstream 0.5kb downstream 500 false Bd5: 28501098-28501597 Brachypodium distachyon
Bradi5g27610 1.0kb upstream 1.0kb upstream 8303 true Bd5: 28501598-28509900 Brachypodium distachyon
Bradi5g27610 1.0kb upstream 1.0kb upstream 1000 false Bd5: 28508901-28509900 Brachypodium distachyon
Bradi5g27610 1.0kb downstream 1.0kb downstream 8303 true Bd5: 28500598-28508900 Brachypodium distachyon
Bradi5g27610 1.0kb downstream 1.0kb downstream 1000 false Bd5: 28500598-28501597 Brachypodium distachyon
Bradi5g27610 2.0kb upstream 2.0kb upstream 9303 true Bd5: 28501598-28510900 Brachypodium distachyon
Bradi5g27610 2.0kb upstream 2.0kb upstream 2000 false Bd5: 28508901-28510900 Brachypodium distachyon
Bradi5g27610 2.0kb downstream 2.0kb downstream 9303 true Bd5: 28499598-28508900 Brachypodium distachyon
Bradi5g27610 2.0kb downstream 2.0kb downstream 2000 false Bd5: 28499598-28501597 Brachypodium distachyon
Bradi5g27610 5.0kb upstream 5.0kb upstream 12303 true Bd5: 28501598-28513900 Brachypodium distachyon
Bradi5g27610 5.0kb upstream 5.0kb upstream 5000 false Bd5: 28508901-28513900 Brachypodium distachyon
Bradi5g27610 5.0kb downstream 5.0kb downstream 12303 true Bd5: 28496598-28508900 Brachypodium distachyon
Bradi5g27610 5.0kb downstream 5.0kb downstream 5000 false Bd5: 28496598-28501597 Brachypodium distachyon
Bradi5g27610 10.0kb upstream 10.0kb upstream 17303 true Bd5: 28501598-28518900 Brachypodium distachyon
Bradi5g27610 10.0kb upstream 10.0kb upstream 10000 false Bd5: 28508901-28518900 Brachypodium distachyon
Bradi5g27610 10.0kb downstream 10.0kb downstream 17303 true Bd5: 28491598-28508900 Brachypodium distachyon
Bradi5g27610 10.0kb downstream 10.0kb downstream 10000 false Bd5: 28491598-28501597 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124577495 5269 Grass View MSA
122047710 5273 Angiosperm View MSA
121346299 5274 Embryophyte View MSA
123428510 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.004        
cufflinks 1.754       High
cufflinks 1.788       High
cufflinks 1.28        
cufflinks 0.546        
cufflinks 1.681        
cufflinks 1.526        
cufflinks 1.222        
cufflinks 1.414        
cufflinks 0.751        
cufflinks 0.53        
cufflinks 1.333        
cufflinks 0.405       Low
cufflinks 0.407       Low
cufflinks 0.403       Low
cufflinks 1.637        
cufflinks 1.182        
cufflinks 2.428       High
cufflinks 0.922        
cufflinks 0.494        
cufflinks 0.748        
cufflinks 1.711        
cufflinks 1.306        
cufflinks 0.912        
cufflinks 1.317        
cufflinks 1.438        
cufflinks 0.55        
cufflinks 1.281        
cufflinks 1.204        
cufflinks 1.444        

0 Strain