Gene : Bradi5g06695 B. distachyon v3.1
Genomic Order:  647 Name:  ? Bradi5g06695
Secondary Identifier:  ? PAC:32810268
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi5g06695 0.5kb upstream 0.5kb upstream 1171 true Bd5: 8896642-8897812 Brachypodium distachyon
Bradi5g06695 0.5kb upstream 0.5kb upstream 500 false Bd5: 8896642-8897141 Brachypodium distachyon
Bradi5g06695 0.5kb downstream 0.5kb downstream 1171 true Bd5: 8897142-8898312 Brachypodium distachyon
Bradi5g06695 0.5kb downstream 0.5kb downstream 500 false Bd5: 8897813-8898312 Brachypodium distachyon
Bradi5g06695 1.0kb upstream 1.0kb upstream 1671 true Bd5: 8896142-8897812 Brachypodium distachyon
Bradi5g06695 1.0kb upstream 1.0kb upstream 1000 false Bd5: 8896142-8897141 Brachypodium distachyon
Bradi5g06695 1.0kb downstream 1.0kb downstream 1671 true Bd5: 8897142-8898812 Brachypodium distachyon
Bradi5g06695 1.0kb downstream 1.0kb downstream 1000 false Bd5: 8897813-8898812 Brachypodium distachyon
Bradi5g06695 2.0kb upstream 2.0kb upstream 2671 true Bd5: 8895142-8897812 Brachypodium distachyon
Bradi5g06695 2.0kb upstream 2.0kb upstream 2000 false Bd5: 8895142-8897141 Brachypodium distachyon
Bradi5g06695 2.0kb downstream 2.0kb downstream 2671 true Bd5: 8897142-8899812 Brachypodium distachyon
Bradi5g06695 2.0kb downstream 2.0kb downstream 2000 false Bd5: 8897813-8899812 Brachypodium distachyon
Bradi5g06695 5.0kb upstream 5.0kb upstream 5671 true Bd5: 8892142-8897812 Brachypodium distachyon
Bradi5g06695 5.0kb upstream 5.0kb upstream 5000 false Bd5: 8892142-8897141 Brachypodium distachyon
Bradi5g06695 5.0kb downstream 5.0kb downstream 5671 true Bd5: 8897142-8902812 Brachypodium distachyon
Bradi5g06695 5.0kb downstream 5.0kb downstream 5000 false Bd5: 8897813-8902812 Brachypodium distachyon
Bradi5g06695 10.0kb upstream 10.0kb upstream 10671 true Bd5: 8887142-8897812 Brachypodium distachyon
Bradi5g06695 10.0kb upstream 10.0kb upstream 10000 false Bd5: 8887142-8897141 Brachypodium distachyon
Bradi5g06695 10.0kb downstream 10.0kb downstream 10671 true Bd5: 8897142-8907812 Brachypodium distachyon
Bradi5g06695 10.0kb downstream 10.0kb downstream 10000 false Bd5: 8897813-8907812 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121902414 5273 Angiosperm Singleton cluster - no MSA
124475422 5269 Grass Singleton cluster - no MSA
121172934 5274 Embryophyte Singleton cluster - no MSA
123211804 5275 Viridiplantae Singleton cluster - no MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.456        
cufflinks 8.2        
cufflinks 12.471     High High
cufflinks 8.05        
cufflinks 1.926       Low
cufflinks 6.862        
cufflinks 7.087        
cufflinks 6.704        
cufflinks 6.459        
cufflinks 8.634        
cufflinks 5.388        
cufflinks 6.3        
cufflinks 5.394        
cufflinks 5.149        
cufflinks 4.697        
cufflinks 6.81        
cufflinks 4.806        
cufflinks 6.427        
cufflinks 3.463        
cufflinks 3.426        
cufflinks 5.371        
cufflinks 8.657        
cufflinks 6.164        
cufflinks 5.506        
cufflinks 5.923        
cufflinks 11.865     High High
cufflinks 9.84     High  
cufflinks 12.973     High High
cufflinks 10.109       High
cufflinks 7.149        

0 Strain