Gene : Bradi5g07170 B. distachyon v3.1
Defline:  (1 of 3) KOG3436 - 60S ribosomal protein L35 Genomic Order:  676
Name:  ? Bradi5g07170 Secondary Identifier:  ? PAC:32809548
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi5g07170 0.5kb upstream 0.5kb upstream 2649 true Bd5: 9708423-9711071 Brachypodium distachyon
Bradi5g07170 0.5kb upstream 0.5kb upstream 500 false Bd5: 9710572-9711071 Brachypodium distachyon
Bradi5g07170 0.5kb downstream 0.5kb downstream 2649 true Bd5: 9707923-9710571 Brachypodium distachyon
Bradi5g07170 0.5kb downstream 0.5kb downstream 500 false Bd5: 9707923-9708422 Brachypodium distachyon
Bradi5g07170 1.0kb upstream 1.0kb upstream 3149 true Bd5: 9708423-9711571 Brachypodium distachyon
Bradi5g07170 1.0kb upstream 1.0kb upstream 1000 false Bd5: 9710572-9711571 Brachypodium distachyon
Bradi5g07170 1.0kb downstream 1.0kb downstream 3149 true Bd5: 9707423-9710571 Brachypodium distachyon
Bradi5g07170 1.0kb downstream 1.0kb downstream 1000 false Bd5: 9707423-9708422 Brachypodium distachyon
Bradi5g07170 2.0kb upstream 2.0kb upstream 4149 true Bd5: 9708423-9712571 Brachypodium distachyon
Bradi5g07170 2.0kb upstream 2.0kb upstream 2000 false Bd5: 9710572-9712571 Brachypodium distachyon
Bradi5g07170 2.0kb downstream 2.0kb downstream 4149 true Bd5: 9706423-9710571 Brachypodium distachyon
Bradi5g07170 2.0kb downstream 2.0kb downstream 2000 false Bd5: 9706423-9708422 Brachypodium distachyon
Bradi5g07170 5.0kb upstream 5.0kb upstream 7149 true Bd5: 9708423-9715571 Brachypodium distachyon
Bradi5g07170 5.0kb upstream 5.0kb upstream 5000 false Bd5: 9710572-9715571 Brachypodium distachyon
Bradi5g07170 5.0kb downstream 5.0kb downstream 7149 true Bd5: 9703423-9710571 Brachypodium distachyon
Bradi5g07170 5.0kb downstream 5.0kb downstream 5000 false Bd5: 9703423-9708422 Brachypodium distachyon
Bradi5g07170 10.0kb upstream 10.0kb upstream 12149 true Bd5: 9708423-9720571 Brachypodium distachyon
Bradi5g07170 10.0kb upstream 10.0kb upstream 10000 false Bd5: 9710572-9720571 Brachypodium distachyon
Bradi5g07170 10.0kb downstream 10.0kb downstream 12149 true Bd5: 9698423-9710571 Brachypodium distachyon
Bradi5g07170 10.0kb downstream 10.0kb downstream 10000 false Bd5: 9698423-9708422 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124586801 5269 Grass View MSA
122050445 5273 Angiosperm View MSA
121345704 5274 Embryophyte View MSA
123426654 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 68.305     High  
cufflinks 55.608     High  
cufflinks 41.897     High  
cufflinks 58.49     High  
cufflinks 30.283     High  
cufflinks 48.875     High  
cufflinks 55.223     High  
cufflinks 40.35     High  
cufflinks 43.02     High  
cufflinks 55.283     High  
cufflinks 7.458       Low
cufflinks 33.137     High  
cufflinks 6.145       Low
cufflinks 7.851     High Low
cufflinks 24.915     High  
cufflinks 50.167     High  
cufflinks 97.837     High High
cufflinks 77.483     High High
cufflinks 83.077     High High
cufflinks 20.173     High  
cufflinks 76.051     High  
cufflinks 30.607     High  
cufflinks 32.662     High  
cufflinks 35.209     High  
cufflinks 55.904     High  
cufflinks 41.049     High  
cufflinks 10.507     High Low
cufflinks 43.844     High  
cufflinks 39.925     High  
cufflinks 63.446     High  

0 Strain