Gene : Bradi5g27630 B. distachyon v3.1
Defline:  (1 of 1) PTHR12383//PTHR12383:SF18 - PROTEASE FAMILY S26 MITOCHONDRIAL INNER MEMBRANE PROTEASE-RELATED // SUBFAMILY NOT NAMED Genomic Order:  3308
Name:  ? Bradi5g27630 Secondary Identifier:  ? PAC:32807975
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi5g27630 0.5kb upstream 0.5kb upstream 2828 true Bd5: 28512709-28515536 Brachypodium distachyon
Bradi5g27630 0.5kb upstream 0.5kb upstream 500 false Bd5: 28512709-28513208 Brachypodium distachyon
Bradi5g27630 0.5kb downstream 0.5kb downstream 2828 true Bd5: 28513209-28516036 Brachypodium distachyon
Bradi5g27630 0.5kb downstream 0.5kb downstream 500 false Bd5: 28515537-28516036 Brachypodium distachyon
Bradi5g27630 1.0kb upstream 1.0kb upstream 3328 true Bd5: 28512209-28515536 Brachypodium distachyon
Bradi5g27630 1.0kb upstream 1.0kb upstream 1000 false Bd5: 28512209-28513208 Brachypodium distachyon
Bradi5g27630 1.0kb downstream 1.0kb downstream 3328 true Bd5: 28513209-28516536 Brachypodium distachyon
Bradi5g27630 1.0kb downstream 1.0kb downstream 1000 false Bd5: 28515537-28516536 Brachypodium distachyon
Bradi5g27630 2.0kb upstream 2.0kb upstream 4328 true Bd5: 28511209-28515536 Brachypodium distachyon
Bradi5g27630 2.0kb upstream 2.0kb upstream 2000 false Bd5: 28511209-28513208 Brachypodium distachyon
Bradi5g27630 2.0kb downstream 2.0kb downstream 4328 true Bd5: 28513209-28517536 Brachypodium distachyon
Bradi5g27630 2.0kb downstream 2.0kb downstream 2000 false Bd5: 28515537-28517536 Brachypodium distachyon
Bradi5g27630 5.0kb upstream 5.0kb upstream 7328 true Bd5: 28508209-28515536 Brachypodium distachyon
Bradi5g27630 5.0kb upstream 5.0kb upstream 5000 false Bd5: 28508209-28513208 Brachypodium distachyon
Bradi5g27630 5.0kb downstream 5.0kb downstream 7328 true Bd5: 28513209-28520536 Brachypodium distachyon
Bradi5g27630 5.0kb downstream 5.0kb downstream 5000 false Bd5: 28515537-28520536 Brachypodium distachyon
Bradi5g27630 10.0kb upstream 10.0kb upstream 12328 true Bd5: 28503209-28515536 Brachypodium distachyon
Bradi5g27630 10.0kb upstream 10.0kb upstream 10000 false Bd5: 28503209-28513208 Brachypodium distachyon
Bradi5g27630 10.0kb downstream 10.0kb downstream 12328 true Bd5: 28513209-28525536 Brachypodium distachyon
Bradi5g27630 10.0kb downstream 10.0kb downstream 10000 false Bd5: 28515537-28525536 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124583441 5269 Grass View MSA
122044516 5273 Angiosperm View MSA
123428894 5275 Viridiplantae View MSA
121348818 5274 Embryophyte View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 6.75        
cufflinks 4.58        
cufflinks 4.79        
cufflinks 4.968        
cufflinks 3.677        
cufflinks 4.088        
cufflinks 4.585        
cufflinks 5.182        
cufflinks 4.155        
cufflinks 6.068        
cufflinks 2.883       Low
cufflinks 4.005        
cufflinks 2.26       Low
cufflinks 2.447       Low
cufflinks 4.519        
cufflinks 4.392        
cufflinks 6.294        
cufflinks 7.603       High
cufflinks 14.564     High High
cufflinks 4.542        
cufflinks 7.571       High
cufflinks 5.399        
cufflinks 4.782        
cufflinks 4.482        
cufflinks 4.82        
cufflinks 6.076        
cufflinks 2.066       Low
cufflinks 5.718        
cufflinks 5.544        
cufflinks 5.334        

0 Strain