Gene : Bradi5g27560 B. distachyon v3.1
Defline:  (1 of 1) K17262 - tubulin-folding cofactor B (TBCB, CKAP1, ALF1) Genomic Order:  3298
Name:  ? Bradi5g27560 Secondary Identifier:  ? PAC:32806972
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi5g27560 0.5kb upstream 0.5kb upstream 3799 true Bd5: 28471578-28475376 Brachypodium distachyon
Bradi5g27560 0.5kb upstream 0.5kb upstream 500 false Bd5: 28474877-28475376 Brachypodium distachyon
Bradi5g27560 0.5kb downstream 0.5kb downstream 3799 true Bd5: 28471078-28474876 Brachypodium distachyon
Bradi5g27560 0.5kb downstream 0.5kb downstream 500 false Bd5: 28471078-28471577 Brachypodium distachyon
Bradi5g27560 1.0kb upstream 1.0kb upstream 4299 true Bd5: 28471578-28475876 Brachypodium distachyon
Bradi5g27560 1.0kb upstream 1.0kb upstream 1000 false Bd5: 28474877-28475876 Brachypodium distachyon
Bradi5g27560 1.0kb downstream 1.0kb downstream 4299 true Bd5: 28470578-28474876 Brachypodium distachyon
Bradi5g27560 1.0kb downstream 1.0kb downstream 1000 false Bd5: 28470578-28471577 Brachypodium distachyon
Bradi5g27560 2.0kb upstream 2.0kb upstream 5299 true Bd5: 28471578-28476876 Brachypodium distachyon
Bradi5g27560 2.0kb upstream 2.0kb upstream 2000 false Bd5: 28474877-28476876 Brachypodium distachyon
Bradi5g27560 2.0kb downstream 2.0kb downstream 5299 true Bd5: 28469578-28474876 Brachypodium distachyon
Bradi5g27560 2.0kb downstream 2.0kb downstream 2000 false Bd5: 28469578-28471577 Brachypodium distachyon
Bradi5g27560 5.0kb upstream 5.0kb upstream 8299 true Bd5: 28471578-28479876 Brachypodium distachyon
Bradi5g27560 5.0kb upstream 5.0kb upstream 5000 false Bd5: 28474877-28479876 Brachypodium distachyon
Bradi5g27560 5.0kb downstream 5.0kb downstream 8299 true Bd5: 28466578-28474876 Brachypodium distachyon
Bradi5g27560 5.0kb downstream 5.0kb downstream 5000 false Bd5: 28466578-28471577 Brachypodium distachyon
Bradi5g27560 10.0kb upstream 10.0kb upstream 13299 true Bd5: 28471578-28484876 Brachypodium distachyon
Bradi5g27560 10.0kb upstream 10.0kb upstream 10000 false Bd5: 28474877-28484876 Brachypodium distachyon
Bradi5g27560 10.0kb downstream 10.0kb downstream 13299 true Bd5: 28461578-28474876 Brachypodium distachyon
Bradi5g27560 10.0kb downstream 10.0kb downstream 10000 false Bd5: 28461578-28471577 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124575162 5269 Grass View MSA
122045722 5273 Angiosperm View MSA
121345954 5274 Embryophyte View MSA
123423760 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 6.023        
cufflinks 5.322        
cufflinks 5.135        
cufflinks 6.912        
cufflinks 5.202        
cufflinks 4.164        
cufflinks 4.286        
cufflinks 3.411        
cufflinks 4.545        
cufflinks 7.202        
cufflinks 2.762       Low
cufflinks 3.544        
cufflinks 1.555       Low
cufflinks 2.265       Low
cufflinks 3.005       Low
cufflinks 4.47        
cufflinks 7.786        
cufflinks 7.726        
cufflinks 9.558       High
cufflinks 2.75       Low
cufflinks 11.128     High High
cufflinks 4.317        
cufflinks 3.826        
cufflinks 4.227        
cufflinks 6.119        
cufflinks 6.15        
cufflinks 2.214       Low
cufflinks 6.871        
cufflinks 5.262        
cufflinks 6.85        

0 Strain