Gene : Bradi1g36620 B. distachyon v3.1
Defline:  (1 of 1) K03025 - DNA-directed RNA polymerase III subunit RPC6 (RPC6, POLR3F) Genomic Order:  4677
Name:  ? Bradi1g36620 Secondary Identifier:  ? PAC:32792238
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi1g36620 0.5kb upstream 0.5kb upstream 4399 true Bd1: 32406785-32411183 Brachypodium distachyon
Bradi1g36620 0.5kb upstream 0.5kb upstream 500 false Bd1: 32406785-32407284 Brachypodium distachyon
Bradi1g36620 0.5kb downstream 0.5kb downstream 4399 true Bd1: 32407285-32411683 Brachypodium distachyon
Bradi1g36620 0.5kb downstream 0.5kb downstream 500 false Bd1: 32411184-32411683 Brachypodium distachyon
Bradi1g36620 1.0kb upstream 1.0kb upstream 4899 true Bd1: 32406285-32411183 Brachypodium distachyon
Bradi1g36620 1.0kb upstream 1.0kb upstream 1000 false Bd1: 32406285-32407284 Brachypodium distachyon
Bradi1g36620 1.0kb downstream 1.0kb downstream 4899 true Bd1: 32407285-32412183 Brachypodium distachyon
Bradi1g36620 1.0kb downstream 1.0kb downstream 1000 false Bd1: 32411184-32412183 Brachypodium distachyon
Bradi1g36620 2.0kb upstream 2.0kb upstream 5899 true Bd1: 32405285-32411183 Brachypodium distachyon
Bradi1g36620 2.0kb upstream 2.0kb upstream 2000 false Bd1: 32405285-32407284 Brachypodium distachyon
Bradi1g36620 2.0kb downstream 2.0kb downstream 5899 true Bd1: 32407285-32413183 Brachypodium distachyon
Bradi1g36620 2.0kb downstream 2.0kb downstream 2000 false Bd1: 32411184-32413183 Brachypodium distachyon
Bradi1g36620 5.0kb upstream 5.0kb upstream 8899 true Bd1: 32402285-32411183 Brachypodium distachyon
Bradi1g36620 5.0kb upstream 5.0kb upstream 5000 false Bd1: 32402285-32407284 Brachypodium distachyon
Bradi1g36620 5.0kb downstream 5.0kb downstream 8899 true Bd1: 32407285-32416183 Brachypodium distachyon
Bradi1g36620 5.0kb downstream 5.0kb downstream 5000 false Bd1: 32411184-32416183 Brachypodium distachyon
Bradi1g36620 10.0kb upstream 10.0kb upstream 13899 true Bd1: 32397285-32411183 Brachypodium distachyon
Bradi1g36620 10.0kb upstream 10.0kb upstream 10000 false Bd1: 32397285-32407284 Brachypodium distachyon
Bradi1g36620 10.0kb downstream 10.0kb downstream 13899 true Bd1: 32407285-32421183 Brachypodium distachyon
Bradi1g36620 10.0kb downstream 10.0kb downstream 10000 false Bd1: 32411184-32421183 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124586252 5269 Grass View MSA
122046766 5273 Angiosperm View MSA
121344415 5274 Embryophyte View MSA
123425900 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.288        
cufflinks 2.014        
cufflinks 1.711        
cufflinks 1.642        
cufflinks 0.563       Low
cufflinks 1.679        
cufflinks 1.838        
cufflinks 1.435        
cufflinks 1.59        
cufflinks 1.133        
cufflinks 1.431        
cufflinks 1.353        
cufflinks 0.904       Low
cufflinks 0.836       Low
cufflinks 0.955        
cufflinks 1.844        
cufflinks 1.288        
cufflinks 2.512       High
cufflinks 1.261        
cufflinks 0.41       Low
cufflinks 1.724        
cufflinks 1.425        
cufflinks 1.284        
cufflinks 1.456        
cufflinks 1.583        
cufflinks 1.627        
cufflinks 1.369        
cufflinks 1.903        
cufflinks 1.55        
cufflinks 1.959        

0 Strain