Gene : Bradi1g40407 B. distachyon v3.1
Defline:  (1 of 1) PTHR12446//PTHR12446:SF29 - TESMIN/TSO1-RELATED Genomic Order:  5086
Name:  ? Bradi1g40407 Secondary Identifier:  ? PAC:32792937
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi1g40407 0.5kb upstream 0.5kb upstream 13565 true Bd1: 37179112-37192676 Brachypodium distachyon
Bradi1g40407 0.5kb upstream 0.5kb upstream 500 false Bd1: 37192177-37192676 Brachypodium distachyon
Bradi1g40407 0.5kb downstream 0.5kb downstream 13565 true Bd1: 37178612-37192176 Brachypodium distachyon
Bradi1g40407 0.5kb downstream 0.5kb downstream 500 false Bd1: 37178612-37179111 Brachypodium distachyon
Bradi1g40407 1.0kb upstream 1.0kb upstream 14065 true Bd1: 37179112-37193176 Brachypodium distachyon
Bradi1g40407 1.0kb upstream 1.0kb upstream 1000 false Bd1: 37192177-37193176 Brachypodium distachyon
Bradi1g40407 1.0kb downstream 1.0kb downstream 14065 true Bd1: 37178112-37192176 Brachypodium distachyon
Bradi1g40407 1.0kb downstream 1.0kb downstream 1000 false Bd1: 37178112-37179111 Brachypodium distachyon
Bradi1g40407 2.0kb upstream 2.0kb upstream 15065 true Bd1: 37179112-37194176 Brachypodium distachyon
Bradi1g40407 2.0kb upstream 2.0kb upstream 2000 false Bd1: 37192177-37194176 Brachypodium distachyon
Bradi1g40407 2.0kb downstream 2.0kb downstream 15065 true Bd1: 37177112-37192176 Brachypodium distachyon
Bradi1g40407 2.0kb downstream 2.0kb downstream 2000 false Bd1: 37177112-37179111 Brachypodium distachyon
Bradi1g40407 5.0kb upstream 5.0kb upstream 18065 true Bd1: 37179112-37197176 Brachypodium distachyon
Bradi1g40407 5.0kb upstream 5.0kb upstream 5000 false Bd1: 37192177-37197176 Brachypodium distachyon
Bradi1g40407 5.0kb downstream 5.0kb downstream 18065 true Bd1: 37174112-37192176 Brachypodium distachyon
Bradi1g40407 5.0kb downstream 5.0kb downstream 5000 false Bd1: 37174112-37179111 Brachypodium distachyon
Bradi1g40407 10.0kb upstream 10.0kb upstream 23065 true Bd1: 37179112-37202176 Brachypodium distachyon
Bradi1g40407 10.0kb upstream 10.0kb upstream 10000 false Bd1: 37192177-37202176 Brachypodium distachyon
Bradi1g40407 10.0kb downstream 10.0kb downstream 23065 true Bd1: 37169112-37192176 Brachypodium distachyon
Bradi1g40407 10.0kb downstream 10.0kb downstream 10000 false Bd1: 37169112-37179111 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124570613 5269 Grass View MSA
122042831 5273 Angiosperm View MSA
121349847 5274 Embryophyte View MSA
123426596 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.109        
cufflinks 0.13        
cufflinks 0.137        
cufflinks 0.119        
cufflinks 0.088     Low Low
cufflinks 0.125        
cufflinks 0.12        
cufflinks 0.12        
cufflinks 0.127        
cufflinks 0.094     Low  
cufflinks 0.193       High
cufflinks 0.118        
cufflinks 0.159        
cufflinks 0.147        
cufflinks 0.138        
cufflinks 0.134        
cufflinks 0.103     Low  
cufflinks 0.154        
cufflinks 0.115     Low  
cufflinks 0.085     Low Low
cufflinks 0.128        
cufflinks 0.149        
cufflinks 0.144        
cufflinks 0.122        
cufflinks 0.117        
cufflinks 0.126        
cufflinks 0.151        
cufflinks 0.118        
cufflinks 0.108     Low  
cufflinks 0.142        

0 Strain