Gene : Bradi5g22580 B. distachyon v3.1
Defline:  (1 of 1) 3.6.3.41 - Heme-transporting ATPase Genomic Order:  2654
Name:  ? Bradi5g22580 Secondary Identifier:  ? PAC:32811430
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi5g22580 0.5kb upstream 0.5kb upstream 3242 true Bd5: 25074748-25077989 Brachypodium distachyon
Bradi5g22580 0.5kb upstream 0.5kb upstream 500 false Bd5: 25077490-25077989 Brachypodium distachyon
Bradi5g22580 0.5kb downstream 0.5kb downstream 3242 true Bd5: 25074248-25077489 Brachypodium distachyon
Bradi5g22580 0.5kb downstream 0.5kb downstream 500 false Bd5: 25074248-25074747 Brachypodium distachyon
Bradi5g22580 1.0kb upstream 1.0kb upstream 3742 true Bd5: 25074748-25078489 Brachypodium distachyon
Bradi5g22580 1.0kb upstream 1.0kb upstream 1000 false Bd5: 25077490-25078489 Brachypodium distachyon
Bradi5g22580 1.0kb downstream 1.0kb downstream 3742 true Bd5: 25073748-25077489 Brachypodium distachyon
Bradi5g22580 1.0kb downstream 1.0kb downstream 1000 false Bd5: 25073748-25074747 Brachypodium distachyon
Bradi5g22580 2.0kb upstream 2.0kb upstream 4742 true Bd5: 25074748-25079489 Brachypodium distachyon
Bradi5g22580 2.0kb upstream 2.0kb upstream 2000 false Bd5: 25077490-25079489 Brachypodium distachyon
Bradi5g22580 2.0kb downstream 2.0kb downstream 4742 true Bd5: 25072748-25077489 Brachypodium distachyon
Bradi5g22580 2.0kb downstream 2.0kb downstream 2000 false Bd5: 25072748-25074747 Brachypodium distachyon
Bradi5g22580 5.0kb upstream 5.0kb upstream 7742 true Bd5: 25074748-25082489 Brachypodium distachyon
Bradi5g22580 5.0kb upstream 5.0kb upstream 5000 false Bd5: 25077490-25082489 Brachypodium distachyon
Bradi5g22580 5.0kb downstream 5.0kb downstream 7742 true Bd5: 25069748-25077489 Brachypodium distachyon
Bradi5g22580 5.0kb downstream 5.0kb downstream 5000 false Bd5: 25069748-25074747 Brachypodium distachyon
Bradi5g22580 10.0kb upstream 10.0kb upstream 12742 true Bd5: 25074748-25087489 Brachypodium distachyon
Bradi5g22580 10.0kb upstream 10.0kb upstream 10000 false Bd5: 25077490-25087489 Brachypodium distachyon
Bradi5g22580 10.0kb downstream 10.0kb downstream 12742 true Bd5: 25064748-25077489 Brachypodium distachyon
Bradi5g22580 10.0kb downstream 10.0kb downstream 10000 false Bd5: 25064748-25074747 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122040954 5273 Angiosperm View MSA
124569129 5269 Grass View MSA
121344405 5274 Embryophyte View MSA
123380037 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.944        
cufflinks 1.177        
cufflinks 1.104        
cufflinks 1.329        
cufflinks 0.63       Low
cufflinks 0.968        
cufflinks 1.436        
cufflinks 1.36        
cufflinks 0.974        
cufflinks 1.411        
cufflinks 1.004        
cufflinks 0.451       Low
cufflinks 0.623       Low
cufflinks 0.897        
cufflinks 0.832        
cufflinks 0.97        
cufflinks 1.152        
cufflinks 0.9        
cufflinks 2.348       High
cufflinks 0.93        
cufflinks 1.759       High
cufflinks 0.657       Low
cufflinks 1.3        
cufflinks 0.886        
cufflinks 1.324        
cufflinks 0.856        
cufflinks 0.758        
cufflinks 1.532        
cufflinks 1.012        
cufflinks 0.852        

0 Strain