Gene : Bradi5g21360 B. distachyon v3.1
Genomic Order:  2481 Name:  ? Bradi5g21360
Secondary Identifier:  ? PAC:32810288
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi5g21360 0.5kb upstream 0.5kb upstream 2119 true Bd5: 24161505-24163623 Brachypodium distachyon
Bradi5g21360 0.5kb upstream 0.5kb upstream 500 false Bd5: 24161505-24162004 Brachypodium distachyon
Bradi5g21360 0.5kb downstream 0.5kb downstream 2119 true Bd5: 24162005-24164123 Brachypodium distachyon
Bradi5g21360 0.5kb downstream 0.5kb downstream 500 false Bd5: 24163624-24164123 Brachypodium distachyon
Bradi5g21360 1.0kb upstream 1.0kb upstream 2619 true Bd5: 24161005-24163623 Brachypodium distachyon
Bradi5g21360 1.0kb upstream 1.0kb upstream 1000 false Bd5: 24161005-24162004 Brachypodium distachyon
Bradi5g21360 1.0kb downstream 1.0kb downstream 2619 true Bd5: 24162005-24164623 Brachypodium distachyon
Bradi5g21360 1.0kb downstream 1.0kb downstream 1000 false Bd5: 24163624-24164623 Brachypodium distachyon
Bradi5g21360 2.0kb upstream 2.0kb upstream 3619 true Bd5: 24160005-24163623 Brachypodium distachyon
Bradi5g21360 2.0kb upstream 2.0kb upstream 2000 false Bd5: 24160005-24162004 Brachypodium distachyon
Bradi5g21360 2.0kb downstream 2.0kb downstream 3619 true Bd5: 24162005-24165623 Brachypodium distachyon
Bradi5g21360 2.0kb downstream 2.0kb downstream 2000 false Bd5: 24163624-24165623 Brachypodium distachyon
Bradi5g21360 5.0kb upstream 5.0kb upstream 6619 true Bd5: 24157005-24163623 Brachypodium distachyon
Bradi5g21360 5.0kb upstream 5.0kb upstream 5000 false Bd5: 24157005-24162004 Brachypodium distachyon
Bradi5g21360 5.0kb downstream 5.0kb downstream 6619 true Bd5: 24162005-24168623 Brachypodium distachyon
Bradi5g21360 5.0kb downstream 5.0kb downstream 5000 false Bd5: 24163624-24168623 Brachypodium distachyon
Bradi5g21360 10.0kb upstream 10.0kb upstream 11619 true Bd5: 24152005-24163623 Brachypodium distachyon
Bradi5g21360 10.0kb upstream 10.0kb upstream 10000 false Bd5: 24152005-24162004 Brachypodium distachyon
Bradi5g21360 10.0kb downstream 10.0kb downstream 11619 true Bd5: 24162005-24173623 Brachypodium distachyon
Bradi5g21360 10.0kb downstream 10.0kb downstream 10000 false Bd5: 24163624-24173623 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124583200 5269 Grass View MSA
122049403 5273 Angiosperm View MSA
121349103 5274 Embryophyte View MSA
123381168 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 19.402     High  
cufflinks 13.22     High  
cufflinks 15.123     High  
cufflinks 19.66     High  
cufflinks 21.215     High  
cufflinks 10.756     High  
cufflinks 15.795     High  
cufflinks 11.428     High  
cufflinks 12.954     High  
cufflinks 37.984     High High
cufflinks 5.511       Low
cufflinks 6.679       Low
cufflinks 3.541       Low
cufflinks 4.01       Low
cufflinks 6.687       Low
cufflinks 9.488     High  
cufflinks 33.465     High  
cufflinks 20.156     High  
cufflinks 42.651     High High
cufflinks 37.306     High High
cufflinks 47.651     High High
cufflinks 18.174     High  
cufflinks 16.498     High  
cufflinks 14.162     High  
cufflinks 19.415     High  
cufflinks 25.91     High  
cufflinks 6.04       Low
cufflinks 36.009     High High
cufflinks 31.221     High  
cufflinks 20.769     High  

0 Strain