Gene : Bradi1g42730 B. distachyon v3.1
Defline:  (1 of 1) K10520 - ankyrin repeat and BTB/POZ domain-containing protein 1 (ABTB1, BPOZ) Genomic Order:  5248
Name:  ? Bradi1g42730 Secondary Identifier:  ? PAC:32792386
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi1g42730 0.5kb upstream 0.5kb upstream 4640 true Bd1: 40175909-40180548 Brachypodium distachyon
Bradi1g42730 0.5kb upstream 0.5kb upstream 500 false Bd1: 40175909-40176408 Brachypodium distachyon
Bradi1g42730 0.5kb downstream 0.5kb downstream 4640 true Bd1: 40176409-40181048 Brachypodium distachyon
Bradi1g42730 0.5kb downstream 0.5kb downstream 500 false Bd1: 40180549-40181048 Brachypodium distachyon
Bradi1g42730 1.0kb upstream 1.0kb upstream 5140 true Bd1: 40175409-40180548 Brachypodium distachyon
Bradi1g42730 1.0kb upstream 1.0kb upstream 1000 false Bd1: 40175409-40176408 Brachypodium distachyon
Bradi1g42730 1.0kb downstream 1.0kb downstream 5140 true Bd1: 40176409-40181548 Brachypodium distachyon
Bradi1g42730 1.0kb downstream 1.0kb downstream 1000 false Bd1: 40180549-40181548 Brachypodium distachyon
Bradi1g42730 2.0kb upstream 2.0kb upstream 6140 true Bd1: 40174409-40180548 Brachypodium distachyon
Bradi1g42730 2.0kb upstream 2.0kb upstream 2000 false Bd1: 40174409-40176408 Brachypodium distachyon
Bradi1g42730 2.0kb downstream 2.0kb downstream 6140 true Bd1: 40176409-40182548 Brachypodium distachyon
Bradi1g42730 2.0kb downstream 2.0kb downstream 2000 false Bd1: 40180549-40182548 Brachypodium distachyon
Bradi1g42730 5.0kb upstream 5.0kb upstream 9140 true Bd1: 40171409-40180548 Brachypodium distachyon
Bradi1g42730 5.0kb upstream 5.0kb upstream 5000 false Bd1: 40171409-40176408 Brachypodium distachyon
Bradi1g42730 5.0kb downstream 5.0kb downstream 9140 true Bd1: 40176409-40185548 Brachypodium distachyon
Bradi1g42730 5.0kb downstream 5.0kb downstream 5000 false Bd1: 40180549-40185548 Brachypodium distachyon
Bradi1g42730 10.0kb upstream 10.0kb upstream 14140 true Bd1: 40166409-40180548 Brachypodium distachyon
Bradi1g42730 10.0kb upstream 10.0kb upstream 10000 false Bd1: 40166409-40176408 Brachypodium distachyon
Bradi1g42730 10.0kb downstream 10.0kb downstream 14140 true Bd1: 40176409-40190548 Brachypodium distachyon
Bradi1g42730 10.0kb downstream 10.0kb downstream 10000 false Bd1: 40180549-40190548 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124575892 5269 Grass View MSA
122051228 5273 Angiosperm View MSA
123429159 5275 Viridiplantae View MSA
121345806 5274 Embryophyte View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.47       Low
cufflinks 1.56        
cufflinks 1.763        
cufflinks 1.529        
cufflinks 0.523       Low
cufflinks 1.169        
cufflinks 1.289        
cufflinks 1.055        
cufflinks 1.098        
cufflinks 1.464        
cufflinks 1.271        
cufflinks 1.346        
cufflinks 1.074        
cufflinks 1.233        
cufflinks 0.891        
cufflinks 1.132        
cufflinks 1.054        
cufflinks 1.035        
cufflinks 0.877        
cufflinks 0.825        
cufflinks 1.202        
cufflinks 1.36        
cufflinks 1.145        
cufflinks 1.057        
cufflinks 1.142        
cufflinks 1.827        
cufflinks 1.621        
cufflinks 1.652        
cufflinks 1.561        
cufflinks 1.057        

0 Strain