Gene : Bradi1g42670 B. distachyon v3.1
Defline:  (1 of 1) PTHR21649:SF7 - CHLOROPHYLL A-B BINDING PROTEIN 6, CHLOROPLASTIC Genomic Order:  5240
Name:  ? Bradi1g42670 Secondary Identifier:  ? PAC:32806555
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi1g42670 0.5kb upstream 0.5kb upstream 2028 true Bd1: 40128331-40130358 Brachypodium distachyon
Bradi1g42670 0.5kb upstream 0.5kb upstream 500 false Bd1: 40129859-40130358 Brachypodium distachyon
Bradi1g42670 0.5kb downstream 0.5kb downstream 2028 true Bd1: 40127831-40129858 Brachypodium distachyon
Bradi1g42670 0.5kb downstream 0.5kb downstream 500 false Bd1: 40127831-40128330 Brachypodium distachyon
Bradi1g42670 1.0kb upstream 1.0kb upstream 2528 true Bd1: 40128331-40130858 Brachypodium distachyon
Bradi1g42670 1.0kb upstream 1.0kb upstream 1000 false Bd1: 40129859-40130858 Brachypodium distachyon
Bradi1g42670 1.0kb downstream 1.0kb downstream 2528 true Bd1: 40127331-40129858 Brachypodium distachyon
Bradi1g42670 1.0kb downstream 1.0kb downstream 1000 false Bd1: 40127331-40128330 Brachypodium distachyon
Bradi1g42670 2.0kb upstream 2.0kb upstream 3528 true Bd1: 40128331-40131858 Brachypodium distachyon
Bradi1g42670 2.0kb upstream 2.0kb upstream 2000 false Bd1: 40129859-40131858 Brachypodium distachyon
Bradi1g42670 2.0kb downstream 2.0kb downstream 3528 true Bd1: 40126331-40129858 Brachypodium distachyon
Bradi1g42670 2.0kb downstream 2.0kb downstream 2000 false Bd1: 40126331-40128330 Brachypodium distachyon
Bradi1g42670 5.0kb upstream 5.0kb upstream 6528 true Bd1: 40128331-40134858 Brachypodium distachyon
Bradi1g42670 5.0kb upstream 5.0kb upstream 5000 false Bd1: 40129859-40134858 Brachypodium distachyon
Bradi1g42670 5.0kb downstream 5.0kb downstream 6528 true Bd1: 40123331-40129858 Brachypodium distachyon
Bradi1g42670 5.0kb downstream 5.0kb downstream 5000 false Bd1: 40123331-40128330 Brachypodium distachyon
Bradi1g42670 10.0kb upstream 10.0kb upstream 11528 true Bd1: 40128331-40139858 Brachypodium distachyon
Bradi1g42670 10.0kb upstream 10.0kb upstream 10000 false Bd1: 40129859-40139858 Brachypodium distachyon
Bradi1g42670 10.0kb downstream 10.0kb downstream 11528 true Bd1: 40118331-40129858 Brachypodium distachyon
Bradi1g42670 10.0kb downstream 10.0kb downstream 10000 false Bd1: 40118331-40128330 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124575654 5269 Grass View MSA
122044861 5273 Angiosperm View MSA
121344658 5274 Embryophyte View MSA
123424228 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1568.622     High  
cufflinks 840.119     High  
cufflinks 98.118     High Low
cufflinks 713.518     High  
cufflinks 1351.061     High  
cufflinks 1692.471     High  
cufflinks 1922.173     High  
cufflinks 1477.167     High  
cufflinks 1720.29     High  
cufflinks 1355.223     High  
cufflinks 1236.288     High  
cufflinks 889.883     High  
cufflinks 2433.183     High  
cufflinks 2644.372     High  
cufflinks 1309.502     High  
cufflinks 1392.479     High  
cufflinks 2085.803     High  
cufflinks 11.898     High Low
cufflinks 844.171     High  
cufflinks 724.855     High  
cufflinks 894.999     High  
cufflinks 636.895     High  
cufflinks 1699.779     High  
cufflinks 2090.16     High  
cufflinks 2314.536     High  
cufflinks 104.757     High Low
cufflinks 1827.73     High  
cufflinks 230.768     High Low
cufflinks 652.614     High  
cufflinks 515.638     High  

0 Strain