Gene : Bradi1g43090 B. distachyon v3.1
Defline:  (1 of 96) PTHR24078 - DNAJ HOMOLOG SUBFAMILY C MEMBER Genomic Order:  5297
Name:  ? Bradi1g43090 Secondary Identifier:  ? PAC:32792851
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi1g43090 0.5kb upstream 0.5kb upstream 827 true Bd1: 40773384-40774210 Brachypodium distachyon
Bradi1g43090 0.5kb upstream 0.5kb upstream 500 false Bd1: 40773384-40773883 Brachypodium distachyon
Bradi1g43090 0.5kb downstream 0.5kb downstream 827 true Bd1: 40773884-40774710 Brachypodium distachyon
Bradi1g43090 0.5kb downstream 0.5kb downstream 500 false Bd1: 40774211-40774710 Brachypodium distachyon
Bradi1g43090 1.0kb upstream 1.0kb upstream 1327 true Bd1: 40772884-40774210 Brachypodium distachyon
Bradi1g43090 1.0kb upstream 1.0kb upstream 1000 false Bd1: 40772884-40773883 Brachypodium distachyon
Bradi1g43090 1.0kb downstream 1.0kb downstream 1327 true Bd1: 40773884-40775210 Brachypodium distachyon
Bradi1g43090 1.0kb downstream 1.0kb downstream 1000 false Bd1: 40774211-40775210 Brachypodium distachyon
Bradi1g43090 2.0kb upstream 2.0kb upstream 2327 true Bd1: 40771884-40774210 Brachypodium distachyon
Bradi1g43090 2.0kb upstream 2.0kb upstream 2000 false Bd1: 40771884-40773883 Brachypodium distachyon
Bradi1g43090 2.0kb downstream 2.0kb downstream 2327 true Bd1: 40773884-40776210 Brachypodium distachyon
Bradi1g43090 2.0kb downstream 2.0kb downstream 2000 false Bd1: 40774211-40776210 Brachypodium distachyon
Bradi1g43090 5.0kb upstream 5.0kb upstream 5327 true Bd1: 40768884-40774210 Brachypodium distachyon
Bradi1g43090 5.0kb upstream 5.0kb upstream 5000 false Bd1: 40768884-40773883 Brachypodium distachyon
Bradi1g43090 5.0kb downstream 5.0kb downstream 5327 true Bd1: 40773884-40779210 Brachypodium distachyon
Bradi1g43090 5.0kb downstream 5.0kb downstream 5000 false Bd1: 40774211-40779210 Brachypodium distachyon
Bradi1g43090 10.0kb upstream 10.0kb upstream 10327 true Bd1: 40763884-40774210 Brachypodium distachyon
Bradi1g43090 10.0kb upstream 10.0kb upstream 10000 false Bd1: 40763884-40773883 Brachypodium distachyon
Bradi1g43090 10.0kb downstream 10.0kb downstream 10327 true Bd1: 40773884-40784210 Brachypodium distachyon
Bradi1g43090 10.0kb downstream 10.0kb downstream 10000 false Bd1: 40774211-40784210 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124583163 5269 Grass View MSA
122049944 5273 Angiosperm View MSA
123429067 5275 Viridiplantae View MSA
121350989 5274 Embryophyte View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.229        
cufflinks 3.865        
cufflinks 6.929        
cufflinks 6.102        
cufflinks 36.867     High High
cufflinks 5.017        
cufflinks 8.634        
cufflinks 1.914       Low
cufflinks 3.24        
cufflinks 8.09        
cufflinks 12.66     High  
cufflinks 1.109       Low
cufflinks 9.009     High  
cufflinks 5.087        
cufflinks 1.443       Low
cufflinks 10.317     High  
cufflinks 11.521     High  
cufflinks 9.73        
cufflinks 30.834     High High
cufflinks 163.772     High High
cufflinks 148.843     High High
cufflinks 3.872        
cufflinks 3.188       Low
cufflinks 3.776        
cufflinks 9.328        
cufflinks 12.592     High  
cufflinks 7.032        
cufflinks 16.406     High  
cufflinks 14.451     High  
cufflinks 29.173     High  

0 Strain