Gene : Bradi1g43230 B. distachyon v3.1
Defline:  (1 of 1) PTHR10774//PTHR10774:SF90 - EXTENDED SYNAPTOTAGMIN-RELATED // SUBFAMILY NOT NAMED Genomic Order:  5315
Name:  ? Bradi1g43230 Secondary Identifier:  ? PAC:32792363
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi1g43230 0.5kb upstream 0.5kb upstream 8220 true Bd1: 40975593-40983812 Brachypodium distachyon
Bradi1g43230 0.5kb upstream 0.5kb upstream 500 false Bd1: 40983313-40983812 Brachypodium distachyon
Bradi1g43230 0.5kb downstream 0.5kb downstream 8220 true Bd1: 40975093-40983312 Brachypodium distachyon
Bradi1g43230 0.5kb downstream 0.5kb downstream 500 false Bd1: 40975093-40975592 Brachypodium distachyon
Bradi1g43230 1.0kb upstream 1.0kb upstream 8720 true Bd1: 40975593-40984312 Brachypodium distachyon
Bradi1g43230 1.0kb upstream 1.0kb upstream 1000 false Bd1: 40983313-40984312 Brachypodium distachyon
Bradi1g43230 1.0kb downstream 1.0kb downstream 8720 true Bd1: 40974593-40983312 Brachypodium distachyon
Bradi1g43230 1.0kb downstream 1.0kb downstream 1000 false Bd1: 40974593-40975592 Brachypodium distachyon
Bradi1g43230 2.0kb upstream 2.0kb upstream 9720 true Bd1: 40975593-40985312 Brachypodium distachyon
Bradi1g43230 2.0kb upstream 2.0kb upstream 2000 false Bd1: 40983313-40985312 Brachypodium distachyon
Bradi1g43230 2.0kb downstream 2.0kb downstream 9720 true Bd1: 40973593-40983312 Brachypodium distachyon
Bradi1g43230 2.0kb downstream 2.0kb downstream 2000 false Bd1: 40973593-40975592 Brachypodium distachyon
Bradi1g43230 5.0kb upstream 5.0kb upstream 12720 true Bd1: 40975593-40988312 Brachypodium distachyon
Bradi1g43230 5.0kb upstream 5.0kb upstream 5000 false Bd1: 40983313-40988312 Brachypodium distachyon
Bradi1g43230 5.0kb downstream 5.0kb downstream 12720 true Bd1: 40970593-40983312 Brachypodium distachyon
Bradi1g43230 5.0kb downstream 5.0kb downstream 5000 false Bd1: 40970593-40975592 Brachypodium distachyon
Bradi1g43230 10.0kb upstream 10.0kb upstream 17720 true Bd1: 40975593-40993312 Brachypodium distachyon
Bradi1g43230 10.0kb upstream 10.0kb upstream 10000 false Bd1: 40983313-40993312 Brachypodium distachyon
Bradi1g43230 10.0kb downstream 10.0kb downstream 17720 true Bd1: 40965593-40983312 Brachypodium distachyon
Bradi1g43230 10.0kb downstream 10.0kb downstream 10000 false Bd1: 40965593-40975592 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124573452 5269 Grass View MSA
122044186 5273 Angiosperm View MSA
121350183 5274 Embryophyte View MSA
123381609 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.183        
cufflinks 1.528        
cufflinks 1.162        
cufflinks 1.086        
cufflinks 0.502       Low
cufflinks 1.825        
cufflinks 1.558        
cufflinks 1.254        
cufflinks 1.599        
cufflinks 0.519       Low
cufflinks 1.927        
cufflinks 1.807        
cufflinks 2.327       High
cufflinks 1.626        
cufflinks 1.845        
cufflinks 1.764        
cufflinks 0.893        
cufflinks 2.377       High
cufflinks 0.59       Low
cufflinks 0.527       Low
cufflinks 1.083        
cufflinks 0.94        
cufflinks 1.28        
cufflinks 1.57        
cufflinks 1.488        
cufflinks 0.93        
cufflinks 2.953       High
cufflinks 0.854        
cufflinks 0.877        
cufflinks 1.063        

0 Strain