Gene : Bradi1g47516 B. distachyon v3.1
Defline:  (1 of 2) PTHR19271:SF5 - CYTOCHROME B Genomic Order:  5910
Name:  ? Bradi1g47516 Secondary Identifier:  ? PAC:32792520
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi1g47516 0.5kb upstream 0.5kb upstream 1692 true Bd1: 46238628-46240319 Brachypodium distachyon
Bradi1g47516 0.5kb upstream 0.5kb upstream 500 false Bd1: 46238628-46239127 Brachypodium distachyon
Bradi1g47516 0.5kb downstream 0.5kb downstream 1692 true Bd1: 46239128-46240819 Brachypodium distachyon
Bradi1g47516 0.5kb downstream 0.5kb downstream 500 false Bd1: 46240320-46240819 Brachypodium distachyon
Bradi1g47516 1.0kb upstream 1.0kb upstream 2192 true Bd1: 46238128-46240319 Brachypodium distachyon
Bradi1g47516 1.0kb upstream 1.0kb upstream 1000 false Bd1: 46238128-46239127 Brachypodium distachyon
Bradi1g47516 1.0kb downstream 1.0kb downstream 2192 true Bd1: 46239128-46241319 Brachypodium distachyon
Bradi1g47516 1.0kb downstream 1.0kb downstream 1000 false Bd1: 46240320-46241319 Brachypodium distachyon
Bradi1g47516 2.0kb upstream 2.0kb upstream 3192 true Bd1: 46237128-46240319 Brachypodium distachyon
Bradi1g47516 2.0kb upstream 2.0kb upstream 2000 false Bd1: 46237128-46239127 Brachypodium distachyon
Bradi1g47516 2.0kb downstream 2.0kb downstream 3192 true Bd1: 46239128-46242319 Brachypodium distachyon
Bradi1g47516 2.0kb downstream 2.0kb downstream 2000 false Bd1: 46240320-46242319 Brachypodium distachyon
Bradi1g47516 5.0kb upstream 5.0kb upstream 6192 true Bd1: 46234128-46240319 Brachypodium distachyon
Bradi1g47516 5.0kb upstream 5.0kb upstream 5000 false Bd1: 46234128-46239127 Brachypodium distachyon
Bradi1g47516 5.0kb downstream 5.0kb downstream 6192 true Bd1: 46239128-46245319 Brachypodium distachyon
Bradi1g47516 5.0kb downstream 5.0kb downstream 5000 false Bd1: 46240320-46245319 Brachypodium distachyon
Bradi1g47516 10.0kb upstream 10.0kb upstream 11192 true Bd1: 46229128-46240319 Brachypodium distachyon
Bradi1g47516 10.0kb upstream 10.0kb upstream 10000 false Bd1: 46229128-46239127 Brachypodium distachyon
Bradi1g47516 10.0kb downstream 10.0kb downstream 11192 true Bd1: 46239128-46250319 Brachypodium distachyon
Bradi1g47516 10.0kb downstream 10.0kb downstream 10000 false Bd1: 46240320-46250319 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124545686 5269 Grass View MSA
122050945 5273 Angiosperm View MSA
123428978 5275 Viridiplantae View MSA
121350678 5274 Embryophyte View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.167        
cufflinks 0.762        
cufflinks 0.711        
cufflinks 0.639        
cufflinks 0.067     Low Low
cufflinks 0.527        
cufflinks 0.536        
cufflinks 0.716        
cufflinks 1.248       High
cufflinks 0.34        
cufflinks 0.183        
cufflinks 0.26        
cufflinks 0.048     Low Low
cufflinks 0.158        
cufflinks 0.123        
cufflinks 0.101       Low
cufflinks 0.419        
cufflinks 0.118     Low  
cufflinks 0.671        
cufflinks 0.086     Low Low
cufflinks 0.278        
cufflinks 0.959       High
cufflinks 0.6        
cufflinks 0.69        
cufflinks 0.783        
cufflinks 0.353        
cufflinks 0.849       High
cufflinks 0.508        
cufflinks 1.017       High
cufflinks 0.61        

0 Strain