Gene : Bradi1g47910 B. distachyon v3.1
Defline:  (1 of 2) 4.4.1.8 - Cystathionine beta-lyase / Cystine lyase Genomic Order:  5979
Name:  ? Bradi1g47910 Secondary Identifier:  ? PAC:32802187
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Bdistachyon PWY-6936 Brachypodium distachyon pathologic  
Bdistachyon PWY-702 Brachypodium distachyon pathologic  
Bdistachyon PWY-724 Brachypodium distachyon pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi1g47910 0.5kb upstream 0.5kb upstream 4725 true Bd1: 46717513-46722237 Brachypodium distachyon
Bradi1g47910 0.5kb upstream 0.5kb upstream 500 false Bd1: 46721738-46722237 Brachypodium distachyon
Bradi1g47910 0.5kb downstream 0.5kb downstream 4725 true Bd1: 46717013-46721737 Brachypodium distachyon
Bradi1g47910 0.5kb downstream 0.5kb downstream 500 false Bd1: 46717013-46717512 Brachypodium distachyon
Bradi1g47910 1.0kb upstream 1.0kb upstream 5225 true Bd1: 46717513-46722737 Brachypodium distachyon
Bradi1g47910 1.0kb upstream 1.0kb upstream 1000 false Bd1: 46721738-46722737 Brachypodium distachyon
Bradi1g47910 1.0kb downstream 1.0kb downstream 5225 true Bd1: 46716513-46721737 Brachypodium distachyon
Bradi1g47910 1.0kb downstream 1.0kb downstream 1000 false Bd1: 46716513-46717512 Brachypodium distachyon
Bradi1g47910 2.0kb upstream 2.0kb upstream 6225 true Bd1: 46717513-46723737 Brachypodium distachyon
Bradi1g47910 2.0kb upstream 2.0kb upstream 2000 false Bd1: 46721738-46723737 Brachypodium distachyon
Bradi1g47910 2.0kb downstream 2.0kb downstream 6225 true Bd1: 46715513-46721737 Brachypodium distachyon
Bradi1g47910 2.0kb downstream 2.0kb downstream 2000 false Bd1: 46715513-46717512 Brachypodium distachyon
Bradi1g47910 5.0kb upstream 5.0kb upstream 9225 true Bd1: 46717513-46726737 Brachypodium distachyon
Bradi1g47910 5.0kb upstream 5.0kb upstream 5000 false Bd1: 46721738-46726737 Brachypodium distachyon
Bradi1g47910 5.0kb downstream 5.0kb downstream 9225 true Bd1: 46712513-46721737 Brachypodium distachyon
Bradi1g47910 5.0kb downstream 5.0kb downstream 5000 false Bd1: 46712513-46717512 Brachypodium distachyon
Bradi1g47910 10.0kb upstream 10.0kb upstream 14225 true Bd1: 46717513-46731737 Brachypodium distachyon
Bradi1g47910 10.0kb upstream 10.0kb upstream 10000 false Bd1: 46721738-46731737 Brachypodium distachyon
Bradi1g47910 10.0kb downstream 10.0kb downstream 14225 true Bd1: 46707513-46721737 Brachypodium distachyon
Bradi1g47910 10.0kb downstream 10.0kb downstream 10000 false Bd1: 46707513-46717512 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041211 5273 Angiosperm View MSA
124572308 5269 Grass View MSA
121349443 5274 Embryophyte View MSA
123424610 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.034        
cufflinks 10.876     High High
cufflinks 6.732        
cufflinks 9.601        
cufflinks 3.899        
cufflinks 9.987     High High
cufflinks 9.991     High High
cufflinks 6.491        
cufflinks 7.684        
cufflinks 4.296        
cufflinks 5.427        
cufflinks 6.275        
cufflinks 4.857        
cufflinks 3.873        
cufflinks 3.437       Low
cufflinks 9.535     High  
cufflinks 7.182        
cufflinks 13.16     High High
cufflinks 5.347        
cufflinks 2.046       Low
cufflinks 8.483        
cufflinks 5.736        
cufflinks 6.006        
cufflinks 7.712        
cufflinks 9.087        
cufflinks 6.265        
cufflinks 5.075        
cufflinks 5.119        
cufflinks 5.234        
cufflinks 7.598        

0 Strain