Gene : Bradi5g16850 B. distachyon v3.1
Genomic Order:  1931 Name:  ? Bradi5g16850
Secondary Identifier:  ? PAC:32807807
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi5g16850 0.5kb upstream 0.5kb upstream 3846 true Bd5: 20258804-20262649 Brachypodium distachyon
Bradi5g16850 0.5kb upstream 0.5kb upstream 500 false Bd5: 20262150-20262649 Brachypodium distachyon
Bradi5g16850 0.5kb downstream 0.5kb downstream 3846 true Bd5: 20258304-20262149 Brachypodium distachyon
Bradi5g16850 0.5kb downstream 0.5kb downstream 500 false Bd5: 20258304-20258803 Brachypodium distachyon
Bradi5g16850 1.0kb upstream 1.0kb upstream 4346 true Bd5: 20258804-20263149 Brachypodium distachyon
Bradi5g16850 1.0kb upstream 1.0kb upstream 1000 false Bd5: 20262150-20263149 Brachypodium distachyon
Bradi5g16850 1.0kb downstream 1.0kb downstream 4346 true Bd5: 20257804-20262149 Brachypodium distachyon
Bradi5g16850 1.0kb downstream 1.0kb downstream 1000 false Bd5: 20257804-20258803 Brachypodium distachyon
Bradi5g16850 2.0kb upstream 2.0kb upstream 5346 true Bd5: 20258804-20264149 Brachypodium distachyon
Bradi5g16850 2.0kb upstream 2.0kb upstream 2000 false Bd5: 20262150-20264149 Brachypodium distachyon
Bradi5g16850 2.0kb downstream 2.0kb downstream 5346 true Bd5: 20256804-20262149 Brachypodium distachyon
Bradi5g16850 2.0kb downstream 2.0kb downstream 2000 false Bd5: 20256804-20258803 Brachypodium distachyon
Bradi5g16850 5.0kb upstream 5.0kb upstream 8346 true Bd5: 20258804-20267149 Brachypodium distachyon
Bradi5g16850 5.0kb upstream 5.0kb upstream 5000 false Bd5: 20262150-20267149 Brachypodium distachyon
Bradi5g16850 5.0kb downstream 5.0kb downstream 8346 true Bd5: 20253804-20262149 Brachypodium distachyon
Bradi5g16850 5.0kb downstream 5.0kb downstream 5000 false Bd5: 20253804-20258803 Brachypodium distachyon
Bradi5g16850 10.0kb upstream 10.0kb upstream 13346 true Bd5: 20258804-20272149 Brachypodium distachyon
Bradi5g16850 10.0kb upstream 10.0kb upstream 10000 false Bd5: 20262150-20272149 Brachypodium distachyon
Bradi5g16850 10.0kb downstream 10.0kb downstream 13346 true Bd5: 20248804-20262149 Brachypodium distachyon
Bradi5g16850 10.0kb downstream 10.0kb downstream 10000 false Bd5: 20248804-20258803 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124582960 5269 Grass View MSA
122048790 5273 Angiosperm View MSA
121349431 5274 Embryophyte View MSA
123381305 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 7.247        
cufflinks 7.925        
cufflinks 7.889        
cufflinks 7.259        
cufflinks 7.683        
cufflinks 7.093        
cufflinks 8.012        
cufflinks 6.829        
cufflinks 6.247        
cufflinks 7.616        
cufflinks 12.54     High High
cufflinks 8.444        
cufflinks 12.274     High High
cufflinks 12.148     High High
cufflinks 7.83        
cufflinks 7.54        
cufflinks 7.275        
cufflinks 5.213       Low
cufflinks 7.867        
cufflinks 8.877        
cufflinks 7.67        
cufflinks 7.724        
cufflinks 6.162        
cufflinks 6.019       Low
cufflinks 6.595        
cufflinks 8.399        
cufflinks 15.754     High High
cufflinks 9.037        
cufflinks 9.001        
cufflinks 6.042       Low

0 Strain