Gene : Bradi1g48697 B. distachyon v3.1
Defline:  (1 of 4) PTHR24223:SF192 - ABC TRANSPORTER C FAMILY MEMBER 10 Genomic Order:  6092
Name:  ? Bradi1g48697 Secondary Identifier:  ? PAC:32803998
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi1g48697 0.5kb upstream 0.5kb upstream 16446 true Bd1: 47557519-47573964 Brachypodium distachyon
Bradi1g48697 0.5kb upstream 0.5kb upstream 500 false Bd1: 47557519-47558018 Brachypodium distachyon
Bradi1g48697 0.5kb downstream 0.5kb downstream 16446 true Bd1: 47558019-47574464 Brachypodium distachyon
Bradi1g48697 0.5kb downstream 0.5kb downstream 500 false Bd1: 47573965-47574464 Brachypodium distachyon
Bradi1g48697 1.0kb upstream 1.0kb upstream 16946 true Bd1: 47557019-47573964 Brachypodium distachyon
Bradi1g48697 1.0kb upstream 1.0kb upstream 1000 false Bd1: 47557019-47558018 Brachypodium distachyon
Bradi1g48697 1.0kb downstream 1.0kb downstream 16946 true Bd1: 47558019-47574964 Brachypodium distachyon
Bradi1g48697 1.0kb downstream 1.0kb downstream 1000 false Bd1: 47573965-47574964 Brachypodium distachyon
Bradi1g48697 2.0kb upstream 2.0kb upstream 17946 true Bd1: 47556019-47573964 Brachypodium distachyon
Bradi1g48697 2.0kb upstream 2.0kb upstream 2000 false Bd1: 47556019-47558018 Brachypodium distachyon
Bradi1g48697 2.0kb downstream 2.0kb downstream 17946 true Bd1: 47558019-47575964 Brachypodium distachyon
Bradi1g48697 2.0kb downstream 2.0kb downstream 2000 false Bd1: 47573965-47575964 Brachypodium distachyon
Bradi1g48697 5.0kb upstream 5.0kb upstream 20946 true Bd1: 47553019-47573964 Brachypodium distachyon
Bradi1g48697 5.0kb upstream 5.0kb upstream 5000 false Bd1: 47553019-47558018 Brachypodium distachyon
Bradi1g48697 5.0kb downstream 5.0kb downstream 20946 true Bd1: 47558019-47578964 Brachypodium distachyon
Bradi1g48697 5.0kb downstream 5.0kb downstream 5000 false Bd1: 47573965-47578964 Brachypodium distachyon
Bradi1g48697 10.0kb upstream 10.0kb upstream 25946 true Bd1: 47548019-47573964 Brachypodium distachyon
Bradi1g48697 10.0kb upstream 10.0kb upstream 10000 false Bd1: 47548019-47558018 Brachypodium distachyon
Bradi1g48697 10.0kb downstream 10.0kb downstream 25946 true Bd1: 47558019-47583964 Brachypodium distachyon
Bradi1g48697 10.0kb downstream 10.0kb downstream 10000 false Bd1: 47573965-47583964 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124545807 5269 Grass View MSA
122043507 5273 Angiosperm View MSA
123429075 5275 Viridiplantae View MSA
121346879 5274 Embryophyte View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.045        
cufflinks 4.693        
cufflinks 3.401        
cufflinks 3.656        
cufflinks 2.345        
cufflinks 3.569        
cufflinks 3.329        
cufflinks 4.534        
cufflinks 3.691        
cufflinks 2.403        
cufflinks 4.015        
cufflinks 3.967        
cufflinks 2.79        
cufflinks 2.227        
cufflinks 4.841        
cufflinks 3.901        
cufflinks 1.762       Low
cufflinks 2.324        
cufflinks 5.08        
cufflinks 1.664       Low
cufflinks 1.145       Low
cufflinks 5.569       High
cufflinks 5.082        
cufflinks 3.221        
cufflinks 2.358        
cufflinks 3.256        
cufflinks 5.383       High
cufflinks 4.066        
cufflinks 4.384        
cufflinks 2.32        

0 Strain