Gene : Bradi5g18000 B. distachyon v3.1
Defline:  (1 of 2) 1.11.1.12//1.11.1.9 - Phospholipid-hydroperoxide glutathione peroxidase / Peroxidation-inhibiting protein // Glutathione peroxidase Genomic Order:  2075
Name:  ? Bradi5g18000 Secondary Identifier:  ? PAC:32809705
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Bdistachyon DETOX1-PWY-1 Brachypodium distachyon pathologic  
Bdistachyon PWY-4081 Brachypodium distachyon pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi5g18000 0.5kb upstream 0.5kb upstream 4746 true Bd5: 21265687-21270432 Brachypodium distachyon
Bradi5g18000 0.5kb upstream 0.5kb upstream 500 false Bd5: 21265687-21266186 Brachypodium distachyon
Bradi5g18000 0.5kb downstream 0.5kb downstream 4746 true Bd5: 21266187-21270932 Brachypodium distachyon
Bradi5g18000 0.5kb downstream 0.5kb downstream 500 false Bd5: 21270433-21270932 Brachypodium distachyon
Bradi5g18000 1.0kb upstream 1.0kb upstream 5246 true Bd5: 21265187-21270432 Brachypodium distachyon
Bradi5g18000 1.0kb upstream 1.0kb upstream 1000 false Bd5: 21265187-21266186 Brachypodium distachyon
Bradi5g18000 1.0kb downstream 1.0kb downstream 5246 true Bd5: 21266187-21271432 Brachypodium distachyon
Bradi5g18000 1.0kb downstream 1.0kb downstream 1000 false Bd5: 21270433-21271432 Brachypodium distachyon
Bradi5g18000 2.0kb upstream 2.0kb upstream 6246 true Bd5: 21264187-21270432 Brachypodium distachyon
Bradi5g18000 2.0kb upstream 2.0kb upstream 2000 false Bd5: 21264187-21266186 Brachypodium distachyon
Bradi5g18000 2.0kb downstream 2.0kb downstream 6246 true Bd5: 21266187-21272432 Brachypodium distachyon
Bradi5g18000 2.0kb downstream 2.0kb downstream 2000 false Bd5: 21270433-21272432 Brachypodium distachyon
Bradi5g18000 5.0kb upstream 5.0kb upstream 9246 true Bd5: 21261187-21270432 Brachypodium distachyon
Bradi5g18000 5.0kb upstream 5.0kb upstream 5000 false Bd5: 21261187-21266186 Brachypodium distachyon
Bradi5g18000 5.0kb downstream 5.0kb downstream 9246 true Bd5: 21266187-21275432 Brachypodium distachyon
Bradi5g18000 5.0kb downstream 5.0kb downstream 5000 false Bd5: 21270433-21275432 Brachypodium distachyon
Bradi5g18000 10.0kb upstream 10.0kb upstream 14246 true Bd5: 21256187-21270432 Brachypodium distachyon
Bradi5g18000 10.0kb upstream 10.0kb upstream 10000 false Bd5: 21256187-21266186 Brachypodium distachyon
Bradi5g18000 10.0kb downstream 10.0kb downstream 14246 true Bd5: 21266187-21280432 Brachypodium distachyon
Bradi5g18000 10.0kb downstream 10.0kb downstream 10000 false Bd5: 21270433-21280432 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124583116 5269 Grass View MSA
122049273 5273 Angiosperm View MSA
121349724 5274 Embryophyte View MSA
123426849 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 19.481     High  
cufflinks 9.696        
cufflinks 10.943     High  
cufflinks 12.343     High  
cufflinks 66.104     High High
cufflinks 9.699     High  
cufflinks 9.234        
cufflinks 25.988     High  
cufflinks 11.589     High  
cufflinks 11.752     High  
cufflinks 11.901     High  
cufflinks 23.193     High  
cufflinks 7.013       Low
cufflinks 6.944       Low
cufflinks 56.095     High High
cufflinks 10.283     High  
cufflinks 25.932     High  
cufflinks 22.385     High  
cufflinks 33.727     High High
cufflinks 49.568     High High
cufflinks 23.419     High  
cufflinks 8.683        
cufflinks 21.165     High  
cufflinks 13.834     High  
cufflinks 9.909     High  
cufflinks 10.467        
cufflinks 5.186       Low
cufflinks 9.825        
cufflinks 8.674        
cufflinks 21.626     High  

0 Strain