Gene : Bradi1g46840 B. distachyon v3.1
Defline:  (1 of 4) K02917 - large subunit ribosomal protein L35Ae (RP-L35Ae, RPL35A) Genomic Order:  5822
Name:  ? Bradi1g46840 Secondary Identifier:  ? PAC:32806130
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi1g46840 0.5kb upstream 0.5kb upstream 2373 true Bd1: 45527957-45530329 Brachypodium distachyon
Bradi1g46840 0.5kb upstream 0.5kb upstream 500 false Bd1: 45527957-45528456 Brachypodium distachyon
Bradi1g46840 0.5kb downstream 0.5kb downstream 2373 true Bd1: 45528457-45530829 Brachypodium distachyon
Bradi1g46840 0.5kb downstream 0.5kb downstream 500 false Bd1: 45530330-45530829 Brachypodium distachyon
Bradi1g46840 1.0kb upstream 1.0kb upstream 2873 true Bd1: 45527457-45530329 Brachypodium distachyon
Bradi1g46840 1.0kb upstream 1.0kb upstream 1000 false Bd1: 45527457-45528456 Brachypodium distachyon
Bradi1g46840 1.0kb downstream 1.0kb downstream 2873 true Bd1: 45528457-45531329 Brachypodium distachyon
Bradi1g46840 1.0kb downstream 1.0kb downstream 1000 false Bd1: 45530330-45531329 Brachypodium distachyon
Bradi1g46840 2.0kb upstream 2.0kb upstream 3873 true Bd1: 45526457-45530329 Brachypodium distachyon
Bradi1g46840 2.0kb upstream 2.0kb upstream 2000 false Bd1: 45526457-45528456 Brachypodium distachyon
Bradi1g46840 2.0kb downstream 2.0kb downstream 3873 true Bd1: 45528457-45532329 Brachypodium distachyon
Bradi1g46840 2.0kb downstream 2.0kb downstream 2000 false Bd1: 45530330-45532329 Brachypodium distachyon
Bradi1g46840 5.0kb upstream 5.0kb upstream 6873 true Bd1: 45523457-45530329 Brachypodium distachyon
Bradi1g46840 5.0kb upstream 5.0kb upstream 5000 false Bd1: 45523457-45528456 Brachypodium distachyon
Bradi1g46840 5.0kb downstream 5.0kb downstream 6873 true Bd1: 45528457-45535329 Brachypodium distachyon
Bradi1g46840 5.0kb downstream 5.0kb downstream 5000 false Bd1: 45530330-45535329 Brachypodium distachyon
Bradi1g46840 10.0kb upstream 10.0kb upstream 11873 true Bd1: 45518457-45530329 Brachypodium distachyon
Bradi1g46840 10.0kb upstream 10.0kb upstream 10000 false Bd1: 45518457-45528456 Brachypodium distachyon
Bradi1g46840 10.0kb downstream 10.0kb downstream 11873 true Bd1: 45528457-45540329 Brachypodium distachyon
Bradi1g46840 10.0kb downstream 10.0kb downstream 10000 false Bd1: 45530330-45540329 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124546113 5269 Grass View MSA
122043317 5273 Angiosperm View MSA
121349974 5274 Embryophyte View MSA
123428152 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 101.475     High  
cufflinks 83.795     High  
cufflinks 71.396     High  
cufflinks 101.178     High  
cufflinks 65.206     High  
cufflinks 77.006     High  
cufflinks 87.379     High  
cufflinks 69.79     High  
cufflinks 74.548     High  
cufflinks 89.096     High  
cufflinks 20.269     High Low
cufflinks 61.819     High  
cufflinks 11.448     High Low
cufflinks 17.398     High Low
cufflinks 33.82     High  
cufflinks 86.264     High  
cufflinks 156.427     High High
cufflinks 149.978     High High
cufflinks 145.137     High High
cufflinks 30.343     High Low
cufflinks 159.004     High High
cufflinks 59.204     High  
cufflinks 57.991     High  
cufflinks 61.187     High  
cufflinks 94.271     High  
cufflinks 73.949     High  
cufflinks 14.58     High Low
cufflinks 69.683     High  
cufflinks 66.079     High  
cufflinks 109.605     High  

0 Strain