Gene : Bradi1g53610 B. distachyon v3.1
Defline:  (1 of 5) KOG0078 - GTP-binding protein SEC4, small G protein superfamily, and related Ras family GTP-binding proteins Genomic Order:  6712
Name:  ? Bradi1g53610 Secondary Identifier:  ? PAC:32796876
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi1g53610 0.5kb upstream 0.5kb upstream 3250 true Bd1: 52067237-52070486 Brachypodium distachyon
Bradi1g53610 0.5kb upstream 0.5kb upstream 500 false Bd1: 52067237-52067736 Brachypodium distachyon
Bradi1g53610 0.5kb downstream 0.5kb downstream 3250 true Bd1: 52067737-52070986 Brachypodium distachyon
Bradi1g53610 0.5kb downstream 0.5kb downstream 500 false Bd1: 52070487-52070986 Brachypodium distachyon
Bradi1g53610 1.0kb upstream 1.0kb upstream 3750 true Bd1: 52066737-52070486 Brachypodium distachyon
Bradi1g53610 1.0kb upstream 1.0kb upstream 1000 false Bd1: 52066737-52067736 Brachypodium distachyon
Bradi1g53610 1.0kb downstream 1.0kb downstream 3750 true Bd1: 52067737-52071486 Brachypodium distachyon
Bradi1g53610 1.0kb downstream 1.0kb downstream 1000 false Bd1: 52070487-52071486 Brachypodium distachyon
Bradi1g53610 2.0kb upstream 2.0kb upstream 4750 true Bd1: 52065737-52070486 Brachypodium distachyon
Bradi1g53610 2.0kb upstream 2.0kb upstream 2000 false Bd1: 52065737-52067736 Brachypodium distachyon
Bradi1g53610 2.0kb downstream 2.0kb downstream 4750 true Bd1: 52067737-52072486 Brachypodium distachyon
Bradi1g53610 2.0kb downstream 2.0kb downstream 2000 false Bd1: 52070487-52072486 Brachypodium distachyon
Bradi1g53610 5.0kb upstream 5.0kb upstream 7750 true Bd1: 52062737-52070486 Brachypodium distachyon
Bradi1g53610 5.0kb upstream 5.0kb upstream 5000 false Bd1: 52062737-52067736 Brachypodium distachyon
Bradi1g53610 5.0kb downstream 5.0kb downstream 7750 true Bd1: 52067737-52075486 Brachypodium distachyon
Bradi1g53610 5.0kb downstream 5.0kb downstream 5000 false Bd1: 52070487-52075486 Brachypodium distachyon
Bradi1g53610 10.0kb upstream 10.0kb upstream 12750 true Bd1: 52057737-52070486 Brachypodium distachyon
Bradi1g53610 10.0kb upstream 10.0kb upstream 10000 false Bd1: 52057737-52067736 Brachypodium distachyon
Bradi1g53610 10.0kb downstream 10.0kb downstream 12750 true Bd1: 52067737-52080486 Brachypodium distachyon
Bradi1g53610 10.0kb downstream 10.0kb downstream 10000 false Bd1: 52070487-52080486 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124587860 5269 Grass View MSA
122050642 5273 Angiosperm View MSA
123429129 5275 Viridiplantae View MSA
121344035 5274 Embryophyte View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.023     Low  
cufflinks 0.083     Low High
cufflinks 0.036     Low  
cufflinks 0.017     Low Low
cufflinks 0.081     Low High
cufflinks 0.055     Low  
cufflinks 0.048     Low  
cufflinks 0.04     Low  
cufflinks 0.073     Low  
cufflinks 0.087     Low High
cufflinks 0.135       High
cufflinks 0.024     Low  
cufflinks 0.027     Low  
cufflinks 0.033     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.035     Low  
cufflinks 0.055     Low  
cufflinks 0.081     Low High
cufflinks 0.12     Low High
cufflinks 0.026     Low  
cufflinks 0.028     Low  
cufflinks 0.032     Low  
cufflinks 0.03     Low  
cufflinks 0.024     Low  
cufflinks 0.095     Low High
cufflinks 0.067     Low  
cufflinks 0.009     Low Low
cufflinks 0.04     Low  
cufflinks 0.076     Low  
cufflinks 0.054     Low  

0 Strain