Gene : Bradi1g54220 B. distachyon v3.1
Defline:  (1 of 1) PTHR16057 - WINS1, 2 PROTEIN Genomic Order:  6793
Name:  ? Bradi1g54220 Secondary Identifier:  ? PAC:32796151
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi1g54220 0.5kb upstream 0.5kb upstream 7307 true Bd1: 52783967-52791273 Brachypodium distachyon
Bradi1g54220 0.5kb upstream 0.5kb upstream 500 false Bd1: 52790774-52791273 Brachypodium distachyon
Bradi1g54220 0.5kb downstream 0.5kb downstream 7307 true Bd1: 52783467-52790773 Brachypodium distachyon
Bradi1g54220 0.5kb downstream 0.5kb downstream 500 false Bd1: 52783467-52783966 Brachypodium distachyon
Bradi1g54220 1.0kb upstream 1.0kb upstream 7807 true Bd1: 52783967-52791773 Brachypodium distachyon
Bradi1g54220 1.0kb upstream 1.0kb upstream 1000 false Bd1: 52790774-52791773 Brachypodium distachyon
Bradi1g54220 1.0kb downstream 1.0kb downstream 7807 true Bd1: 52782967-52790773 Brachypodium distachyon
Bradi1g54220 1.0kb downstream 1.0kb downstream 1000 false Bd1: 52782967-52783966 Brachypodium distachyon
Bradi1g54220 2.0kb upstream 2.0kb upstream 8807 true Bd1: 52783967-52792773 Brachypodium distachyon
Bradi1g54220 2.0kb upstream 2.0kb upstream 2000 false Bd1: 52790774-52792773 Brachypodium distachyon
Bradi1g54220 2.0kb downstream 2.0kb downstream 8807 true Bd1: 52781967-52790773 Brachypodium distachyon
Bradi1g54220 2.0kb downstream 2.0kb downstream 2000 false Bd1: 52781967-52783966 Brachypodium distachyon
Bradi1g54220 5.0kb upstream 5.0kb upstream 11807 true Bd1: 52783967-52795773 Brachypodium distachyon
Bradi1g54220 5.0kb upstream 5.0kb upstream 5000 false Bd1: 52790774-52795773 Brachypodium distachyon
Bradi1g54220 5.0kb downstream 5.0kb downstream 11807 true Bd1: 52778967-52790773 Brachypodium distachyon
Bradi1g54220 5.0kb downstream 5.0kb downstream 5000 false Bd1: 52778967-52783966 Brachypodium distachyon
Bradi1g54220 10.0kb upstream 10.0kb upstream 16807 true Bd1: 52783967-52800773 Brachypodium distachyon
Bradi1g54220 10.0kb upstream 10.0kb upstream 10000 false Bd1: 52790774-52800773 Brachypodium distachyon
Bradi1g54220 10.0kb downstream 10.0kb downstream 16807 true Bd1: 52773967-52790773 Brachypodium distachyon
Bradi1g54220 10.0kb downstream 10.0kb downstream 10000 false Bd1: 52773967-52783966 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124576360 5269 Grass View MSA
122042842 5273 Angiosperm View MSA
121348888 5274 Embryophyte View MSA
123381062 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.952       Low
cufflinks 2.353        
cufflinks 2.577        
cufflinks 1.97        
cufflinks 0.943       Low
cufflinks 2.085        
cufflinks 1.849        
cufflinks 1.813        
cufflinks 2.259        
cufflinks 1.633        
cufflinks 2.646        
cufflinks 2.374        
cufflinks 2.108        
cufflinks 1.989        
cufflinks 1.384        
cufflinks 2.059        
cufflinks 1.005       Low
cufflinks 2.614        
cufflinks 0.82       Low
cufflinks 0.892       Low
cufflinks 1.039       Low
cufflinks 2.76        
cufflinks 1.791        
cufflinks 1.878        
cufflinks 2.089        
cufflinks 2.254        
cufflinks 2.413        
cufflinks 2.35        
cufflinks 2.368        
cufflinks 1.894        

0 Strain