Gene : Bradi1g54440 B. distachyon v3.1
Genomic Order:  6818 Name:  ? Bradi1g54440
Secondary Identifier:  ? PAC:32800313
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi1g54440 0.5kb upstream 0.5kb upstream 2078 true Bd1: 52980663-52982740 Brachypodium distachyon
Bradi1g54440 0.5kb upstream 0.5kb upstream 500 false Bd1: 52982241-52982740 Brachypodium distachyon
Bradi1g54440 0.5kb downstream 0.5kb downstream 2078 true Bd1: 52980163-52982240 Brachypodium distachyon
Bradi1g54440 0.5kb downstream 0.5kb downstream 500 false Bd1: 52980163-52980662 Brachypodium distachyon
Bradi1g54440 1.0kb upstream 1.0kb upstream 2578 true Bd1: 52980663-52983240 Brachypodium distachyon
Bradi1g54440 1.0kb upstream 1.0kb upstream 1000 false Bd1: 52982241-52983240 Brachypodium distachyon
Bradi1g54440 1.0kb downstream 1.0kb downstream 2578 true Bd1: 52979663-52982240 Brachypodium distachyon
Bradi1g54440 1.0kb downstream 1.0kb downstream 1000 false Bd1: 52979663-52980662 Brachypodium distachyon
Bradi1g54440 2.0kb upstream 2.0kb upstream 3578 true Bd1: 52980663-52984240 Brachypodium distachyon
Bradi1g54440 2.0kb upstream 2.0kb upstream 2000 false Bd1: 52982241-52984240 Brachypodium distachyon
Bradi1g54440 2.0kb downstream 2.0kb downstream 3578 true Bd1: 52978663-52982240 Brachypodium distachyon
Bradi1g54440 2.0kb downstream 2.0kb downstream 2000 false Bd1: 52978663-52980662 Brachypodium distachyon
Bradi1g54440 5.0kb upstream 5.0kb upstream 6578 true Bd1: 52980663-52987240 Brachypodium distachyon
Bradi1g54440 5.0kb upstream 5.0kb upstream 5000 false Bd1: 52982241-52987240 Brachypodium distachyon
Bradi1g54440 5.0kb downstream 5.0kb downstream 6578 true Bd1: 52975663-52982240 Brachypodium distachyon
Bradi1g54440 5.0kb downstream 5.0kb downstream 5000 false Bd1: 52975663-52980662 Brachypodium distachyon
Bradi1g54440 10.0kb upstream 10.0kb upstream 11578 true Bd1: 52980663-52992240 Brachypodium distachyon
Bradi1g54440 10.0kb upstream 10.0kb upstream 10000 false Bd1: 52982241-52992240 Brachypodium distachyon
Bradi1g54440 10.0kb downstream 10.0kb downstream 11578 true Bd1: 52970663-52982240 Brachypodium distachyon
Bradi1g54440 10.0kb downstream 10.0kb downstream 10000 false Bd1: 52970663-52980662 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124578913 5269 Grass View MSA
122044291 5273 Angiosperm View MSA
121310268 5274 Embryophyte View MSA
123347804 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 23.136     High  
cufflinks 15.085     High  
cufflinks 10.9     High  
cufflinks 9.691       Low
cufflinks 56.418     High High
cufflinks 16.63     High  
cufflinks 19.521     High  
cufflinks 9.566     High Low
cufflinks 13.011     High  
cufflinks 13.153     High  
cufflinks 51.957     High High
cufflinks 12.455     High  
cufflinks 26.488     High  
cufflinks 27.876     High  
cufflinks 13.595     High  
cufflinks 18.058     High  
cufflinks 22.423     High  
cufflinks 16.771     High  
cufflinks 101.798     High High
cufflinks 311.763     High High
cufflinks 29.561     High  
cufflinks 8.053       Low
cufflinks 9.968     High  
cufflinks 11.662     High  
cufflinks 16.838     High  
cufflinks 12.629     High  
cufflinks 19.555     High  
cufflinks 13.437     High  
cufflinks 8.722       Low
cufflinks 18.27     High  

0 Strain