Gene : Bradi1g49760 B. distachyon v3.1
Defline:  (1 of 2) K09493 - T-complex protein 1 subunit alpha (CCT1, TCP1) Genomic Order:  6242
Name:  ? Bradi1g49760 Secondary Identifier:  ? PAC:32798930
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi1g49760 0.5kb upstream 0.5kb upstream 8353 true Bd1: 48575472-48583824 Brachypodium distachyon
Bradi1g49760 0.5kb upstream 0.5kb upstream 500 false Bd1: 48583325-48583824 Brachypodium distachyon
Bradi1g49760 0.5kb downstream 0.5kb downstream 8353 true Bd1: 48574972-48583324 Brachypodium distachyon
Bradi1g49760 0.5kb downstream 0.5kb downstream 500 false Bd1: 48574972-48575471 Brachypodium distachyon
Bradi1g49760 1.0kb upstream 1.0kb upstream 8853 true Bd1: 48575472-48584324 Brachypodium distachyon
Bradi1g49760 1.0kb upstream 1.0kb upstream 1000 false Bd1: 48583325-48584324 Brachypodium distachyon
Bradi1g49760 1.0kb downstream 1.0kb downstream 8853 true Bd1: 48574472-48583324 Brachypodium distachyon
Bradi1g49760 1.0kb downstream 1.0kb downstream 1000 false Bd1: 48574472-48575471 Brachypodium distachyon
Bradi1g49760 2.0kb upstream 2.0kb upstream 9853 true Bd1: 48575472-48585324 Brachypodium distachyon
Bradi1g49760 2.0kb upstream 2.0kb upstream 2000 false Bd1: 48583325-48585324 Brachypodium distachyon
Bradi1g49760 2.0kb downstream 2.0kb downstream 9853 true Bd1: 48573472-48583324 Brachypodium distachyon
Bradi1g49760 2.0kb downstream 2.0kb downstream 2000 false Bd1: 48573472-48575471 Brachypodium distachyon
Bradi1g49760 5.0kb upstream 5.0kb upstream 12853 true Bd1: 48575472-48588324 Brachypodium distachyon
Bradi1g49760 5.0kb upstream 5.0kb upstream 5000 false Bd1: 48583325-48588324 Brachypodium distachyon
Bradi1g49760 5.0kb downstream 5.0kb downstream 12853 true Bd1: 48570472-48583324 Brachypodium distachyon
Bradi1g49760 5.0kb downstream 5.0kb downstream 5000 false Bd1: 48570472-48575471 Brachypodium distachyon
Bradi1g49760 10.0kb upstream 10.0kb upstream 17853 true Bd1: 48575472-48593324 Brachypodium distachyon
Bradi1g49760 10.0kb upstream 10.0kb upstream 10000 false Bd1: 48583325-48593324 Brachypodium distachyon
Bradi1g49760 10.0kb downstream 10.0kb downstream 17853 true Bd1: 48565472-48583324 Brachypodium distachyon
Bradi1g49760 10.0kb downstream 10.0kb downstream 10000 false Bd1: 48565472-48575471 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124575057 5269 Grass View MSA
122046551 5273 Angiosperm View MSA
121345633 5274 Embryophyte View MSA
123423902 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 12.369     High  
cufflinks 16.887     High  
cufflinks 15.185     High  
cufflinks 16.779     High  
cufflinks 8.059        
cufflinks 14.671     High  
cufflinks 14.066     High  
cufflinks 9.604     High  
cufflinks 12.806     High  
cufflinks 8.631        
cufflinks 3.542       Low
cufflinks 11.066     High  
cufflinks 2.479       Low
cufflinks 2.633       Low
cufflinks 5.48        
cufflinks 14.79     High  
cufflinks 14.327     High  
cufflinks 28.47     High High
cufflinks 11.214        
cufflinks 1.602       Low
cufflinks 16.299     High  
cufflinks 10.982     High  
cufflinks 8.932        
cufflinks 11.633     High  
cufflinks 14.866     High  
cufflinks 13.512     High  
cufflinks 2.947       Low
cufflinks 10.042        
cufflinks 9.88        
cufflinks 17.545     High  

0 Strain