Gene : Bradi1g50190 B. distachyon v3.1
Defline:  (1 of 1) PTHR10825//PTHR10825:SF26 - RING FINGER DOMAIN-CONTAINING, POLYCOMB GROUP COMPONENT Genomic Order:  6300
Name:  ? Bradi1g50190 Secondary Identifier:  ? PAC:32803889
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi1g50190 0.5kb upstream 0.5kb upstream 2306 true Bd1: 49014907-49017212 Brachypodium distachyon
Bradi1g50190 0.5kb upstream 0.5kb upstream 500 false Bd1: 49016713-49017212 Brachypodium distachyon
Bradi1g50190 0.5kb downstream 0.5kb downstream 2306 true Bd1: 49014407-49016712 Brachypodium distachyon
Bradi1g50190 0.5kb downstream 0.5kb downstream 500 false Bd1: 49014407-49014906 Brachypodium distachyon
Bradi1g50190 1.0kb upstream 1.0kb upstream 2806 true Bd1: 49014907-49017712 Brachypodium distachyon
Bradi1g50190 1.0kb upstream 1.0kb upstream 1000 false Bd1: 49016713-49017712 Brachypodium distachyon
Bradi1g50190 1.0kb downstream 1.0kb downstream 2806 true Bd1: 49013907-49016712 Brachypodium distachyon
Bradi1g50190 1.0kb downstream 1.0kb downstream 1000 false Bd1: 49013907-49014906 Brachypodium distachyon
Bradi1g50190 2.0kb upstream 2.0kb upstream 3806 true Bd1: 49014907-49018712 Brachypodium distachyon
Bradi1g50190 2.0kb upstream 2.0kb upstream 2000 false Bd1: 49016713-49018712 Brachypodium distachyon
Bradi1g50190 2.0kb downstream 2.0kb downstream 3806 true Bd1: 49012907-49016712 Brachypodium distachyon
Bradi1g50190 2.0kb downstream 2.0kb downstream 2000 false Bd1: 49012907-49014906 Brachypodium distachyon
Bradi1g50190 5.0kb upstream 5.0kb upstream 6806 true Bd1: 49014907-49021712 Brachypodium distachyon
Bradi1g50190 5.0kb upstream 5.0kb upstream 5000 false Bd1: 49016713-49021712 Brachypodium distachyon
Bradi1g50190 5.0kb downstream 5.0kb downstream 6806 true Bd1: 49009907-49016712 Brachypodium distachyon
Bradi1g50190 5.0kb downstream 5.0kb downstream 5000 false Bd1: 49009907-49014906 Brachypodium distachyon
Bradi1g50190 10.0kb upstream 10.0kb upstream 11806 true Bd1: 49014907-49026712 Brachypodium distachyon
Bradi1g50190 10.0kb upstream 10.0kb upstream 10000 false Bd1: 49016713-49026712 Brachypodium distachyon
Bradi1g50190 10.0kb downstream 10.0kb downstream 11806 true Bd1: 49004907-49016712 Brachypodium distachyon
Bradi1g50190 10.0kb downstream 10.0kb downstream 10000 false Bd1: 49004907-49014906 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124572519 5269 Grass View MSA
122049409 5273 Angiosperm View MSA
121311385 5274 Embryophyte View MSA
123348689 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.951        
cufflinks 1.638        
cufflinks 1.799        
cufflinks 1.661        
cufflinks 0.883        
cufflinks 1.353        
cufflinks 1.961        
cufflinks 1.315        
cufflinks 1.283        
cufflinks 1.31        
cufflinks 1.115        
cufflinks 0.934        
cufflinks 0.609       Low
cufflinks 0.631       Low
cufflinks 0.381       Low
cufflinks 1.39        
cufflinks 1.718        
cufflinks 2.726       High
cufflinks 1.544        
cufflinks 2.133       High
cufflinks 2.603       High
cufflinks 1.416        
cufflinks 1.241        
cufflinks 1.045        
cufflinks 1.608        
cufflinks 1.58        
cufflinks 0.714       Low
cufflinks 1.704        
cufflinks 1.315        
cufflinks 2.017        

0 Strain