Gene : Bradi1g50470 B. distachyon v3.1
Defline:  (1 of 1) PTHR34267:SF1 - AT0ZI1 PROTEIN Genomic Order:  6336
Name:  ? Bradi1g50470 Secondary Identifier:  ? PAC:32803375
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi1g50470 0.5kb upstream 0.5kb upstream 3118 true Bd1: 49278498-49281615 Brachypodium distachyon
Bradi1g50470 0.5kb upstream 0.5kb upstream 500 false Bd1: 49281116-49281615 Brachypodium distachyon
Bradi1g50470 0.5kb downstream 0.5kb downstream 3118 true Bd1: 49277998-49281115 Brachypodium distachyon
Bradi1g50470 0.5kb downstream 0.5kb downstream 500 false Bd1: 49277998-49278497 Brachypodium distachyon
Bradi1g50470 1.0kb upstream 1.0kb upstream 3618 true Bd1: 49278498-49282115 Brachypodium distachyon
Bradi1g50470 1.0kb upstream 1.0kb upstream 1000 false Bd1: 49281116-49282115 Brachypodium distachyon
Bradi1g50470 1.0kb downstream 1.0kb downstream 3618 true Bd1: 49277498-49281115 Brachypodium distachyon
Bradi1g50470 1.0kb downstream 1.0kb downstream 1000 false Bd1: 49277498-49278497 Brachypodium distachyon
Bradi1g50470 2.0kb upstream 2.0kb upstream 4618 true Bd1: 49278498-49283115 Brachypodium distachyon
Bradi1g50470 2.0kb upstream 2.0kb upstream 2000 false Bd1: 49281116-49283115 Brachypodium distachyon
Bradi1g50470 2.0kb downstream 2.0kb downstream 4618 true Bd1: 49276498-49281115 Brachypodium distachyon
Bradi1g50470 2.0kb downstream 2.0kb downstream 2000 false Bd1: 49276498-49278497 Brachypodium distachyon
Bradi1g50470 5.0kb upstream 5.0kb upstream 7618 true Bd1: 49278498-49286115 Brachypodium distachyon
Bradi1g50470 5.0kb upstream 5.0kb upstream 5000 false Bd1: 49281116-49286115 Brachypodium distachyon
Bradi1g50470 5.0kb downstream 5.0kb downstream 7618 true Bd1: 49273498-49281115 Brachypodium distachyon
Bradi1g50470 5.0kb downstream 5.0kb downstream 5000 false Bd1: 49273498-49278497 Brachypodium distachyon
Bradi1g50470 10.0kb upstream 10.0kb upstream 12618 true Bd1: 49278498-49291115 Brachypodium distachyon
Bradi1g50470 10.0kb upstream 10.0kb upstream 10000 false Bd1: 49281116-49291115 Brachypodium distachyon
Bradi1g50470 10.0kb downstream 10.0kb downstream 12618 true Bd1: 49268498-49281115 Brachypodium distachyon
Bradi1g50470 10.0kb downstream 10.0kb downstream 10000 false Bd1: 49268498-49278497 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124590665 5269 Grass View MSA
122051261 5273 Angiosperm View MSA
121351565 5274 Embryophyte View MSA
123382229 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 44.603     High  
cufflinks 40.137     High  
cufflinks 40.456     High  
cufflinks 51.769     High  
cufflinks 51.059     High  
cufflinks 38.963     High  
cufflinks 42.025     High  
cufflinks 40.164     High  
cufflinks 37.19     High  
cufflinks 46.567     High  
cufflinks 19.156     High Low
cufflinks 41.181     High  
cufflinks 21.245     High Low
cufflinks 23.612     High Low
cufflinks 35.7     High  
cufflinks 42.952     High  
cufflinks 59.349     High  
cufflinks 68.6     High High
cufflinks 57.395     High  
cufflinks 44.444     High  
cufflinks 90.767     High High
cufflinks 34.441     High  
cufflinks 37.737     High  
cufflinks 43.098     High  
cufflinks 45.383     High  
cufflinks 58.877     High  
cufflinks 22.362     High Low
cufflinks 44.908     High  
cufflinks 39.956     High  
cufflinks 84.603     High High

0 Strain