Gene : Bradi1g51940 B. distachyon v3.1
Defline:  (1 of 1) K14571 - ribosome biogenesis ATPase (RIX7, NVL) Genomic Order:  6526
Name:  ? Bradi1g51940 Secondary Identifier:  ? PAC:32793975
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi1g51940 0.5kb upstream 0.5kb upstream 6016 true Bd1: 50538700-50544715 Brachypodium distachyon
Bradi1g51940 0.5kb upstream 0.5kb upstream 500 false Bd1: 50538700-50539199 Brachypodium distachyon
Bradi1g51940 0.5kb downstream 0.5kb downstream 6016 true Bd1: 50539200-50545215 Brachypodium distachyon
Bradi1g51940 0.5kb downstream 0.5kb downstream 500 false Bd1: 50544716-50545215 Brachypodium distachyon
Bradi1g51940 1.0kb upstream 1.0kb upstream 6516 true Bd1: 50538200-50544715 Brachypodium distachyon
Bradi1g51940 1.0kb upstream 1.0kb upstream 1000 false Bd1: 50538200-50539199 Brachypodium distachyon
Bradi1g51940 1.0kb downstream 1.0kb downstream 6516 true Bd1: 50539200-50545715 Brachypodium distachyon
Bradi1g51940 1.0kb downstream 1.0kb downstream 1000 false Bd1: 50544716-50545715 Brachypodium distachyon
Bradi1g51940 2.0kb upstream 2.0kb upstream 7516 true Bd1: 50537200-50544715 Brachypodium distachyon
Bradi1g51940 2.0kb upstream 2.0kb upstream 2000 false Bd1: 50537200-50539199 Brachypodium distachyon
Bradi1g51940 2.0kb downstream 2.0kb downstream 7516 true Bd1: 50539200-50546715 Brachypodium distachyon
Bradi1g51940 2.0kb downstream 2.0kb downstream 2000 false Bd1: 50544716-50546715 Brachypodium distachyon
Bradi1g51940 5.0kb upstream 5.0kb upstream 10516 true Bd1: 50534200-50544715 Brachypodium distachyon
Bradi1g51940 5.0kb upstream 5.0kb upstream 5000 false Bd1: 50534200-50539199 Brachypodium distachyon
Bradi1g51940 5.0kb downstream 5.0kb downstream 10516 true Bd1: 50539200-50549715 Brachypodium distachyon
Bradi1g51940 5.0kb downstream 5.0kb downstream 5000 false Bd1: 50544716-50549715 Brachypodium distachyon
Bradi1g51940 10.0kb upstream 10.0kb upstream 15516 true Bd1: 50529200-50544715 Brachypodium distachyon
Bradi1g51940 10.0kb upstream 10.0kb upstream 10000 false Bd1: 50529200-50539199 Brachypodium distachyon
Bradi1g51940 10.0kb downstream 10.0kb downstream 15516 true Bd1: 50539200-50554715 Brachypodium distachyon
Bradi1g51940 10.0kb downstream 10.0kb downstream 10000 false Bd1: 50544716-50554715 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124573967 5269 Grass View MSA
122045822 5273 Angiosperm View MSA
121351435 5274 Embryophyte View MSA
123426108 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.945        
cufflinks 6.749        
cufflinks 8.728       High
cufflinks 5.834        
cufflinks 2.57       Low
cufflinks 6.085        
cufflinks 5.962        
cufflinks 4.878        
cufflinks 5.998        
cufflinks 5.619        
cufflinks 6.453        
cufflinks 6.571        
cufflinks 4.158        
cufflinks 4.327        
cufflinks 4.383        
cufflinks 6.629        
cufflinks 4.224        
cufflinks 10.022       High
cufflinks 4.666        
cufflinks 3.103       Low
cufflinks 5.368        
cufflinks 8.89       High
cufflinks 5.104        
cufflinks 5.13        
cufflinks 5.431        
cufflinks 7.587        
cufflinks 5.883        
cufflinks 7.781        
cufflinks 7.586        
cufflinks 7.625        

0 Strain