Gene : Bradi1g52060 B. distachyon v3.1
Genomic Order:  6539 Name:  ? Bradi1g52060
Secondary Identifier:  ? PAC:32801655
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi1g52060 0.5kb upstream 0.5kb upstream 3173 true Bd1: 50608645-50611817 Brachypodium distachyon
Bradi1g52060 0.5kb upstream 0.5kb upstream 500 false Bd1: 50611318-50611817 Brachypodium distachyon
Bradi1g52060 0.5kb downstream 0.5kb downstream 3173 true Bd1: 50608145-50611317 Brachypodium distachyon
Bradi1g52060 0.5kb downstream 0.5kb downstream 500 false Bd1: 50608145-50608644 Brachypodium distachyon
Bradi1g52060 1.0kb upstream 1.0kb upstream 3673 true Bd1: 50608645-50612317 Brachypodium distachyon
Bradi1g52060 1.0kb upstream 1.0kb upstream 1000 false Bd1: 50611318-50612317 Brachypodium distachyon
Bradi1g52060 1.0kb downstream 1.0kb downstream 3673 true Bd1: 50607645-50611317 Brachypodium distachyon
Bradi1g52060 1.0kb downstream 1.0kb downstream 1000 false Bd1: 50607645-50608644 Brachypodium distachyon
Bradi1g52060 2.0kb upstream 2.0kb upstream 4673 true Bd1: 50608645-50613317 Brachypodium distachyon
Bradi1g52060 2.0kb upstream 2.0kb upstream 2000 false Bd1: 50611318-50613317 Brachypodium distachyon
Bradi1g52060 2.0kb downstream 2.0kb downstream 4673 true Bd1: 50606645-50611317 Brachypodium distachyon
Bradi1g52060 2.0kb downstream 2.0kb downstream 2000 false Bd1: 50606645-50608644 Brachypodium distachyon
Bradi1g52060 5.0kb upstream 5.0kb upstream 7673 true Bd1: 50608645-50616317 Brachypodium distachyon
Bradi1g52060 5.0kb upstream 5.0kb upstream 5000 false Bd1: 50611318-50616317 Brachypodium distachyon
Bradi1g52060 5.0kb downstream 5.0kb downstream 7673 true Bd1: 50603645-50611317 Brachypodium distachyon
Bradi1g52060 5.0kb downstream 5.0kb downstream 5000 false Bd1: 50603645-50608644 Brachypodium distachyon
Bradi1g52060 10.0kb upstream 10.0kb upstream 12673 true Bd1: 50608645-50621317 Brachypodium distachyon
Bradi1g52060 10.0kb upstream 10.0kb upstream 10000 false Bd1: 50611318-50621317 Brachypodium distachyon
Bradi1g52060 10.0kb downstream 10.0kb downstream 12673 true Bd1: 50598645-50611317 Brachypodium distachyon
Bradi1g52060 10.0kb downstream 10.0kb downstream 10000 false Bd1: 50598645-50608644 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124581237 5269 Grass View MSA
122047689 5273 Angiosperm View MSA
121310779 5274 Embryophyte View MSA
123348183 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.807       Low
cufflinks 2.374        
cufflinks 2.485        
cufflinks 2.462        
cufflinks 2.626        
cufflinks 2.288        
cufflinks 2.296        
cufflinks 3.023        
cufflinks 2.941        
cufflinks 2.336        
cufflinks 3.847       High
cufflinks 3.197        
cufflinks 2.64        
cufflinks 2.773        
cufflinks 2.48        
cufflinks 2.491        
cufflinks 2.105        
cufflinks 2.467        
cufflinks 2.78        
cufflinks 3.021        
cufflinks 2.875        
cufflinks 2.76        
cufflinks 3.212        
cufflinks 2.545        
cufflinks 2.184        
cufflinks 2.036        
cufflinks 4.198       High
cufflinks 2.375        
cufflinks 2.548        
cufflinks 3.124        

0 Strain